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Gene: Nfya (nuclear transcription factor Y subunit alpha) Rattus norvegicus
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Symbol: Nfya
Name: nuclear transcription factor Y subunit alpha
Description: Exhibits transcription cofactor binding activity. Predicted to contribute to RNA polymerase II distal enhancer sequence-specific DNA binding activity. Predicted to be involved in positive regulation of stem cell proliferation; positive regulation of transcription by RNA polymerase II; and regulation of stem cell population maintenance. Localizes to the CCAAT-binding activity factor complex. Orthologous to human NFYA (nuclear transcription factor Y subunit alpha); PARTICIPATES IN altered p53 signaling pathway; antigen processing and presentation pathway; tuberculosis pathway; INTERACTS WITH 6-propyl-2-thiouracil; bisphenol A; N-nitrosodiethylamine.
Type: protein-coding
RefSeq Status: PROVISIONAL
Also known as: CAAT box DNA-binding protein subunit A; CAAT-box DNA-binding protein subunit A; CBF-A; CBF-B; CCAAT-binding transcription factor subunit A; CCAAT-binding transcription factor subunit B; NF-YA; nuclear transcription factor Y subunit A; nuclear transcription factor-Y alpha
Orthologs:
Homo sapiens (human) : NFYA (nuclear transcription factor Y subunit alpha)  HGNC  Alliance
Mus musculus (house mouse) : Nfya (nuclear transcription factor-Y alpha)  MGI  Alliance
Chinchilla lanigera (long-tailed chinchilla) : Nfya (nuclear transcription factor Y subunit alpha)
Pan paniscus (bonobo/pygmy chimpanzee) : NFYA (nuclear transcription factor Y subunit alpha)
Canis lupus familiaris (dog) : NFYA (nuclear transcription factor Y subunit alpha)
Ictidomys tridecemlineatus (thirteen-lined ground squirrel) : Nfya (nuclear transcription factor Y subunit alpha)
Sus scrofa (pig) : NFYA (nuclear transcription factor Y subunit alpha)
more info ...
Latest Assembly: Rnor_6.0 - RGSC Genome Assembly v6.0
Position:
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Rnor_6.0914,551,752 - 14,577,002 (+)NCBIRnor6.0Rnor_6.0rn6Rnor6.0
Rnor_6.0 Ensembl914,551,758 - 14,576,967 (+)Ensembl
Rnor_5.0913,474,255 - 13,499,504 (+)NCBIRnor5.0Rnor_5.0rn5Rnor5.0
RGSC_v3.497,970,040 - 7,994,375 (+)NCBIRGSC3.4rn4RGSC3.4
RGSC_v3.197,970,039 - 7,994,375 (+)NCBI
Celera910,361,436 - 10,385,715 (+)NCBICelera
Cytogenetic Map9q12NCBI
JBrowse: View Region in Genome Browser (JBrowse)
Model


Disease Annotations
Gene-Chemical Interaction Annotations
Gene Ontology Annotations
Molecular Pathway Annotations
References - curated
References - uncurated

Genomics

Comparative Map Data
Position Markers
QTLs in Region (Rnor_6.0)
miRNA Target Status

Expression

RNA-SEQ Expression

Sequence

Nucleotide Sequences
Protein Sequences
Transcriptome
Promoters

Strain Variation

Strain Sequence Variants (Rnor 6.0)

Additional Information

External Database Links
Nomenclature History
RGD Curation Notes
 
More on Nfya
Alliance Gene
NCBI Gene
Ensembl Gene
JBrowse: rn5 rn6
NCBI Genome Data Viewer

CRRD Object Information
CRRD ID: 70976
Created: 2002-07-09
Species: Rattus norvegicus
Last Modified: 2019-10-16
Status: ACTIVE



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RGD is funded by grant HL64541 from the National Heart, Lung, and Blood Institute on behalf of the NIH.