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Gene: Smad9 (SMAD family member 9) Rattus norvegicus
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Symbol: Smad9
Name: SMAD family member 9
Description: Predicted to have DNA binding activity; DNA-binding transcription factor activity; and metal ion binding activity. Involved in several processes, including Mullerian duct regression; positive regulation of transcription, DNA-templated; and response to hypoxia. Predicted to localize to cytosol and nucleoplasm. Biomarker of pulmonary hypertension. Human ortholog(s) of this gene implicated in primary pulmonary hypertension. Orthologous to human SMAD9 (SMAD family member 9); PARTICIPATES IN Bone morphogenetic proteins signaling pathway; transforming growth factor-beta superfamily mediated signaling pathway; INTERACTS WITH 3,3',4,4',5-pentachlorobiphenyl; acrylamide; ammonium chloride.
Type: protein-coding
RefSeq Status: PROVISIONAL
Also known as: MAD homolog 9; MAD homolog 9 (Drosophila); Madh9; mothers against decapentaplegic homolog 9; mothers against DPP homolog 9; SMAD 9; Smad8
Orthologs:
Homo sapiens (human) : SMAD9 (SMAD family member 9)  HGNC  Alliance
Mus musculus (house mouse) : Smad9 (SMAD family member 9)  MGI  Alliance
Chinchilla lanigera (long-tailed chinchilla) : Smad9 (SMAD family member 9)
Pan paniscus (bonobo/pygmy chimpanzee) : SMAD9 (SMAD family member 9)
Canis lupus familiaris (dog) : SMAD9 (SMAD family member 9)
Ictidomys tridecemlineatus (thirteen-lined ground squirrel) : Smad9 (SMAD family member 9)
Sus scrofa (pig) : SMAD9 (SMAD family member 9)
Chlorocebus sabaeus (African green monkey) : SMAD9 (SMAD family member 9)
Heterocephalus glaber (naked mole-rat) : Smad9 (SMAD family member 9)
more info ...
Latest Assembly: Rnor_6.0 - RGSC Genome Assembly v6.0
Position:
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Rnor_6.02143,951,725 - 144,002,025 (+)NCBIRnor6.0Rnor_6.0rn6Rnor6.0
Rnor_6.0 Ensembl2144,191,846 - 144,212,138 (+)EnsemblRnor6.0rn6Rnor6.0
Rnor_6.0 Ensembl2143,951,838 - 143,998,205 (+)EnsemblRnor6.0rn6Rnor6.0
Rnor_5.02163,609,377 - 163,629,230 (+)NCBIRnor5.0Rnor_5.0rn5Rnor5.0
RGSC_v3.42144,014,436 - 144,030,672 (+)NCBIRGSC3.4rn4RGSC3.4
RGSC_v3.12143,964,398 - 143,980,635 (+)NCBI
Celera2133,441,288 - 133,491,482 (+)NCBICelera
Cytogenetic Map2q26NCBI
RH 3.4 Map2858.9RGD
JBrowse: View Region in Genome Browser (JBrowse)
Model


Disease Annotations
Gene-Chemical Interaction Annotations
Gene Ontology Annotations
Molecular Pathway Annotations
References - curated
References - uncurated

Genomics

Comparative Map Data
Position Markers
QTLs in Region (Rnor_6.0)
miRNA Target Status

Expression

RNA-SEQ Expression

Sequence

Nucleotide Sequences
Protein Sequences
Transcriptome
Promoters

Strain Variation

Strain Sequence Variants (Rnor 6.0)

Additional Information

External Database Links
Nomenclature History
RGD Curation Notes
 
More on Smad9
Alliance Gene
NCBI Gene
Ensembl Gene
JBrowse: rn5 rn6
NCBI Genome Data Viewer

CRRD Object Information
CRRD ID: 71004
Created: 2002-07-09
Species: Rattus norvegicus
Last Modified: 2020-09-09
Status: ACTIVE



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RGD is funded by grant HL64541 from the National Heart, Lung, and Blood Institute on behalf of the NIH.