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Gene: Smyd2 (SET and MYND domain containing 2) Rattus norvegicus
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Symbol: Smyd2
Name: SET and MYND domain containing 2
Description: Predicted to have RNA polymerase II complex binding activity; histone methyltransferase activity (H3-K36 specific); and p53 binding activity. Involved in heart development. Localizes to the cytosol and nucleus. Orthologous to human SMYD2 (SET and MYND domain containing 2); PARTICIPATES IN histone modification pathway; methionine cycle/metabolic pathway; p53 signaling pathway; INTERACTS WITH 17beta-estradiol; 2,3,7,8-tetrachlorodibenzodioxine; benzo[a]pyrene.
Type: protein-coding
RefSeq Status: VALIDATED
Also known as: histone methyltransferase SMYD2; HSKM-B; N-lysine methyltransferase SMYD2; SET and MYND domain-containing protein 2
Orthologs:
Homo sapiens (human) : SMYD2 (SET and MYND domain containing 2)  HGNC  Alliance
Mus musculus (house mouse) : Smyd2 (SET and MYND domain containing 2)  MGI  Alliance
Chinchilla lanigera (long-tailed chinchilla) : Smyd2 (SET and MYND domain containing 2)
Pan paniscus (bonobo/pygmy chimpanzee) : SMYD2 (SET and MYND domain containing 2)
Canis lupus familiaris (dog) : SMYD2 (SET and MYND domain containing 2)
Ictidomys tridecemlineatus (thirteen-lined ground squirrel) : Smyd2 (SET and MYND domain containing 2)
Sus scrofa (pig) : SMYD2 (SET and MYND domain containing 2)
more info ...
Latest Assembly: Rnor_6.0 - RGSC Genome Assembly v6.0
Position:
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Rnor_6.013108,642,156 - 108,686,293 (+)NCBIRnor6.0Rnor_6.0rn6Rnor6.0
Rnor_6.0 Ensembl13108,642,156 - 108,686,290 (+)Ensembl
Rnor_5.013113,261,746 - 113,302,399 (+)NCBIRnor5.0Rnor_5.0rn5Rnor5.0
RGSC_v3.413106,160,147 - 106,201,473 (-)NCBIRGSC3.4rn4RGSC3.4
RGSC_v3.113106,349,462 - 106,390,567 (-)NCBI
Celera13100,910,865 - 100,950,701 (-)NCBICelera
Cytogenetic Map13q27NCBI
JBrowse: View Region in Genome Browser (JBrowse)
Model


Disease Annotations
Gene-Chemical Interaction Annotations
Gene Ontology Annotations
Molecular Pathway Annotations
References - curated
References - uncurated

Genomics

Comparative Map Data
Position Markers
QTLs in Region (Rnor_6.0)
miRNA Target Status

Expression

RNA-SEQ Expression

Sequence

Nucleotide Sequences
Protein Sequences
Transcriptome
Promoters

Strain Variation

Strain Sequence Variants (Rnor 6.0)
Damaging Variants

Additional Information

External Database Links
Nomenclature History
 
More on Smyd2
Alliance Gene
NCBI Gene
Ensembl Gene
JBrowse: rn5 rn6
NCBI Genome Data Viewer

CRRD Object Information
CRRD ID: 727785
Created: 2003-11-05
Species: Rattus norvegicus
Last Modified: 2019-08-20
Status: ACTIVE



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RGD is funded by grant HL64541 from the National Heart, Lung, and Blood Institute on behalf of the NIH.