Submit Data |  Help |  Video Tutorials |  News |  Publications |  FTP Download |  REST API |  Citing RGD |  Contact   
Gene: Chp2 (calcineurin-like EF hand protein 2) Rattus norvegicus
Analyze
Symbol: Chp2
Name: calcineurin-like EF hand protein 2
Description: Predicted to have calcium ion binding activity. Predicted to be involved in several processes, including positive regulation of calcineurin-NFAT signaling cascade; positive regulation of cellular metabolic process; and positive regulation of protein import into nucleus. Localizes to the cytoplasm; nucleus; and plasma membrane. Orthologous to human CHP2 (calcineurin like EF-hand protein 2); PARTICIPATES IN Alzheimer's disease pathway; amyotrophic lateral sclerosis pathway; apoptotic cell death pathway; INTERACTS WITH acrylamide; ammonium chloride; bisphenol A.
Type: protein-coding
RefSeq Status: PROVISIONAL
Also known as: calcineurin B homologous protein 2; calcineurin homologous protein isoform 2; chp-2
Orthologs:
Homo sapiens (human) : CHP2 (calcineurin like EF-hand protein 2)  HGNC  Alliance
Mus musculus (house mouse) : Chp2 (calcineurin-like EF hand protein 2)  MGI  Alliance
Chinchilla lanigera (long-tailed chinchilla) : Chp2 (calcineurin like EF-hand protein 2)
Pan paniscus (bonobo/pygmy chimpanzee) : CHP2 (calcineurin like EF-hand protein 2)
Canis lupus familiaris (dog) : CHP2 (calcineurin like EF-hand protein 2)
Ictidomys tridecemlineatus (thirteen-lined ground squirrel) : Chp2 (calcineurin like EF-hand protein 2)
Sus scrofa (pig) : CHP2 (calcineurin like EF-hand protein 2)
more info ...
Latest Assembly: Rnor_6.0 - RGSC Genome Assembly v6.0
NCBI Annotation Information: Annotation category: suggests misassembly
Position:
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Rnor_6.01192,169,634 - 192,173,228 (+)NCBIRnor6.0Rnor_6.0rn6Rnor6.0
Rnor_5.01199,230,968 - 199,234,018 (+)NCBIRnor5.0Rnor_5.0rn5Rnor5.0
RGSC_v3.41181,055,296 - 181,058,207 (+)NCBIRGSC3.4rn4RGSC3.4
RGSC_v3.11181,195,210 - 181,198,123 (+)NCBI
Celera1174,477,349 - 174,480,508 (+)NCBICelera
Cytogenetic Map1q36NCBI
JBrowse: View Region in Genome Browser (JBrowse)
Model


Gene-Chemical Interaction Annotations
Gene Ontology Annotations
Molecular Pathway Annotations
References - curated
References - uncurated

Genomics

Comparative Map Data
Position Markers
QTLs in Region (Rnor_6.0)
miRNA Target Status

Sequence

Nucleotide Sequences
Protein Sequences
Transcriptome
Promoters

Strain Variation

Strain Sequence Variants (Rnor 5.0)

Additional Information

External Database Links
Nomenclature History
RGD Curation Notes
 
More on Chp2
Alliance Gene
NCBI Gene
Ensembl Gene
JBrowse: rn5 rn6
NCBI Genome Data Viewer

CRRD Object Information
CRRD ID: 727796
Created: 2003-11-05
Species: Rattus norvegicus
Last Modified: 2019-08-20
Status: ACTIVE



NHLBI Logo

RGD is funded by grant HL64541 from the National Heart, Lung, and Blood Institute on behalf of the NIH.