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Gene: Sgpp1 (sphingosine-1-phosphate phosphatase 1) Rattus norvegicus
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Symbol: Sgpp1
Name: sphingosine-1-phosphate phosphatase 1
Description: Predicted to have sphingosine-1-phosphate phosphatase activity. Predicted to be involved in several processes, including ER to Golgi ceramide transport; apoptotic signaling pathway; and sphingolipid metabolic process. Predicted to localize to the endoplasmic reticulum; membrane; and nucleoplasm. Orthologous to human SGPP1 (sphingosine-1-phosphate phosphatase 1); PARTICIPATES IN sphingosine 1-phosphate signaling pathway; sphingolipid metabolic pathway; INTERACTS WITH 17beta-estradiol; 2,3,7,8-tetrachlorodibenzodioxine; 2,4-dinitrotoluene.
Type: protein-coding
RefSeq Status: VALIDATED
Also known as: LOC81536; sphingosine-1-phosphatase 1; sphingosine-1-phosphate phosphohydrolase; Spp1; SPPase1
Orthologs:
Homo sapiens (human) : SGPP1 (sphingosine-1-phosphate phosphatase 1)  HGNC  Alliance
Mus musculus (house mouse) : Sgpp1 (sphingosine-1-phosphate phosphatase 1)  MGI  Alliance
Chinchilla lanigera (long-tailed chinchilla) : Sgpp1 (sphingosine-1-phosphate phosphatase 1)
Pan paniscus (bonobo/pygmy chimpanzee) : SGPP1 (sphingosine-1-phosphate phosphatase 1)
Canis lupus familiaris (dog) : SGPP1 (sphingosine-1-phosphate phosphatase 1)
Ictidomys tridecemlineatus (thirteen-lined ground squirrel) : Sgpp1 (sphingosine-1-phosphate phosphatase 1)
Sus scrofa (pig) : SGPP1 (sphingosine-1-phosphate phosphatase 1)
more info ...
Latest Assembly: Rnor_6.0 - RGSC Genome Assembly v6.0
Position:
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Rnor_6.0698,675,324 - 98,696,492 (-)NCBIRnor6.0Rnor_6.0rn6Rnor6.0
Rnor_6.0 Ensembl698,675,326 - 98,695,988 (-)Ensembl
Rnor_5.06108,093,013 - 108,114,339 (-)NCBIRnor5.0Rnor_5.0rn5Rnor5.0
RGSC_v3.4698,306,168 - 98,327,175 (-)NCBIRGSC3.4rn4RGSC3.4
RGSC_v3.1698,311,877 - 98,330,264 (-)NCBI
Celera692,851,441 - 92,872,597 (-)NCBICelera
Cytogenetic Map6q24NCBI
JBrowse: View Region in Genome Browser (JBrowse)
Model


Gene-Chemical Interaction Annotations
Gene Ontology Annotations
Molecular Pathway Annotations
References - curated
References - uncurated

Genomics

Comparative Map Data
Position Markers
QTLs in Region (Rnor_6.0)
miRNA Target Status

Expression

RNA-SEQ Expression

Sequence

Nucleotide Sequences
Protein Sequences
Transcriptome

Strain Variation

Strain Sequence Variants (Rnor 6.0)

Additional Information

External Database Links
Nomenclature History
 
More on Sgpp1
Alliance Gene
NCBI Gene
Ensembl Gene
JBrowse: rn5 rn6
NCBI Genome Data Viewer

CRRD Object Information
CRRD ID: 727829
Created: 2003-11-05
Species: Rattus norvegicus
Last Modified: 2019-11-27
Status: ACTIVE



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RGD is funded by grant HL64541 from the National Heart, Lung, and Blood Institute on behalf of the NIH.