Gene: Sptbn1 (spectrin, beta, non-erythrocytic 1) Rattus norvegicus
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Symbol: Sptbn1
Name: spectrin, beta, non-erythrocytic 1
Description: Predicted to have GTPase binding activity and ankyrin binding activity; predicted to be involved in several processes, including Golgi to plasma membrane protein transport, common-partner SMAD protein phosphorylation, and membrane assembly; localizes to the glutamatergic synapse, postsynapse, and protein-containing complex; orthologous to human SPTBN1 (spectrin beta, non-erythrocytic 1); PARTICIPATES IN transforming growth factor-beta Smad dependent signaling pathway; INTERACTS WITH 1,1,1-Trichloro-2-(o-chlorophenyl)-2-(p-chlorophenyl)ethane; 17alpha-ethynylestradiol; 2,3,7,8-tetrachlorodibenzodioxine.
Type: protein-coding
RefSeq Status: PROVISIONAL
Also known as: beta II spectrin-like (short form); bSPII-; cytoskeleton protein; non-erythroid spectrin beta; short form of beta II spectrin; spectrin beta 2; spectrin beta chain, brain 1; spectrin beta chain, non-erythrocytic 1; spectrin beta non-erythrocytic 1; Spnb1; Spnb2
Orthologs:
Homo sapiens (human) : SPTBN1 (spectrin beta, non-erythrocytic 1)  HGNC  Alliance
Mus musculus (house mouse) : Sptbn1 (spectrin beta, non-erythrocytic 1)  MGI  Alliance
Chinchilla lanigera (long-tailed chinchilla) : Sptbn1 (spectrin beta, non-erythrocytic 1)
Pan paniscus (bonobo/pygmy chimpanzee) : SPTBN1 (spectrin beta, non-erythrocytic 1)
Canis lupus familiaris (dog) : SPTBN1 (spectrin beta, non-erythrocytic 1)
Ictidomys tridecemlineatus (thirteen-lined ground squirrel) : Sptbn1 (spectrin beta, non-erythrocytic 1)
Sus scrofa (pig) : SPTBN1 (spectrin beta, non-erythrocytic 1)
more info ...
Latest Assembly: Rnor_6.0 - RGSC Genome Assembly v6.0
Position:
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Rnor_6.014114,517,839 - 114,700,199 (-)NCBIRnor6.0Rnor_6.0rn6Rnor6.0
Rnor_5.014114,188,053 - 114,356,233 (-)NCBIRnor5.0Rnor_5.0rn5Rnor5.0
RGSC_v3.414111,076,741 - 111,246,286 (+)NCBIRGSC3.4rn4RGSC3.4
RGSC_v3.114111,255,392 - 111,259,578 (+)NCBI
Celera14102,708,226 - 102,873,561 (-)NCBICelera
Cytogenetic Map14q22NCBI
JBrowse: View Region in Genome Browser (JBrowse)
Model


Disease Annotations
Gene-Chemical Interaction Annotations
Gene Ontology Annotations
Molecular Pathway Annotations
References - curated
References - uncurated

Genomics

Comparative Map Data
Position Markers
QTLs in Region (Rnor_6.0)
miRNA Target Status

Sequence

Nucleotide Sequences
Protein Sequences
Transcriptome
Promoters

Strain Variation

Strain Sequence Variants (Rnor 5.0)
Damaging Variants

Additional Information

External Database Links
Nomenclature History
 
More on Sptbn1
Alliance Gene
NCBI Gene
Ensembl Gene
JBrowse: rn5 rn6
NCBI Genome Data Viewer

CRRD Object Information
CRRD ID: 727922
Created: 2003-11-05
Species: Rattus norvegicus
Last Modified: 2019-05-07
Status: ACTIVE



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RGD is funded by grant HL64541 from the National Heart, Lung, and Blood Institute on behalf of the NIH.