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Gene: Smptb (polypyrimidine tract-binding protein) Rattus norvegicus
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Symbol: Smptb
Name: polypyrimidine tract-binding protein
Description: Exhibits RNA binding activity. Involved in alternative mRNA splicing, via spliceosome. Localizes to the nucleus. Orthologous to human PTBP1 (polypyrimidine tract binding protein 1); INTERACTS WITH C60 fullerene; copper atom; copper(0).
Type: protein-coding
RefSeq Status: VALIDATED
Orthologs:
No known orthologs. homologs ...
Latest Assembly: Rnor_6.0 - RGSC Genome Assembly v6.0
Position:
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Rnor_6.0X17,484,839 - 17,486,721 (-)NCBIRnor6.0Rnor_6.0rn6Rnor6.0
Rnor_6.0 EnsemblX17,484,839 - 17,486,721 (-)Ensembl
Rnor_5.0X18,263,118 - 18,265,000 (-)NCBIRnor5.0Rnor_5.0rn5Rnor5.0
RGSC_v3.4X28,512,713 - 28,514,595 (-)NCBIRGSC3.4rn4RGSC3.4
RGSC_v3.1X28,566,181 - 28,568,064 (-)NCBI
CeleraX16,688,694 - 16,690,576 (+)NCBICelera
Cytogenetic MapXq12NCBI
JBrowse: View Region in Genome Browser (JBrowse)
Model


Gene-Chemical Interaction Annotations
Gene Ontology Annotations
References - curated

Genomics

QTLs in Region (Rnor_6.0)
miRNA Target Status

Expression

RNA-SEQ Expression

Sequence

Nucleotide Sequences
Protein Sequences
Transcriptome
Promoters

Strain Variation

Strain Sequence Variants (Rnor 6.0)

Additional Information

External Database Links
Nomenclature History
 
More on Smptb
Alliance Gene
NCBI Gene
Ensembl Gene
JBrowse: rn5 rn6
NCBI Genome Data Viewer

CRRD Object Information
CRRD ID: 727953
Created: 2003-11-05
Species: Rattus norvegicus
Last Modified: 2019-08-20
Status: ACTIVE



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RGD is funded by grant HL64541 from the National Heart, Lung, and Blood Institute on behalf of the NIH.