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Gene: Lhx9 (LIM homeobox 9) Rattus norvegicus
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Symbol: Lhx9
Name: LIM homeobox 9
Description: Predicted to have DNA-binding transcription factor activity, RNA polymerase II-specific; RNA polymerase II regulatory region sequence-specific DNA binding activity; and transcription corepressor activity. Predicted to be involved in several processes, including cell population proliferation; gonad development; and regulation of transcription, DNA-templated. Predicted to localize to the nucleus. Orthologous to human LHX9 (LIM homeobox 9); INTERACTS WITH 6-propyl-2-thiouracil; ammonium chloride; bisphenol A.
Type: protein-coding
RefSeq Status: PROVISIONAL
Also known as: LIM homeobox 9-like; LIM homeobox protein 9; LIM-homeodomain type transcription factor 9; LIM/homeobox protein Lhx9; MGC156570
Orthologs:
Homo sapiens (human) : LHX9 (LIM homeobox 9)  HGNC  Alliance
Mus musculus (house mouse) : Lhx9 (LIM homeobox protein 9)  MGI  Alliance
Chinchilla lanigera (long-tailed chinchilla) : Lhx9 (LIM homeobox 9)
Pan paniscus (bonobo/pygmy chimpanzee) : LHX9 (LIM homeobox 9)
Canis lupus familiaris (dog) : LHX9 (LIM homeobox 9)
Ictidomys tridecemlineatus (thirteen-lined ground squirrel) : Lhx9 (LIM homeobox 9)
Sus scrofa (pig) : LHX9 (LIM homeobox 9)
more info ...
Latest Assembly: Rnor_6.0 - RGSC Genome Assembly v6.0
Position:
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Rnor_6.01355,854,543 - 55,879,305 (-)NCBIRnor6.0Rnor_6.0rn6Rnor6.0
Rnor_5.01360,880,668 - 60,905,112 (-)NCBIRnor5.0Rnor_5.0rn5Rnor5.0
RGSC_v3.41352,143,492 - 52,160,922 (-)NCBIRGSC3.4rn4RGSC3.4
RGSC_v3.11352,157,571 - 52,175,002 (-)NCBI
Celera1350,673,951 - 50,690,517 (-)NCBICelera
Cytogenetic Map13q13NCBI
JBrowse: View Region in Genome Browser (JBrowse)
Model


References - curated
References - uncurated

Genomics

Comparative Map Data
Position Markers
QTLs in Region (Rnor_6.0)
miRNA Target Status

Sequence

Nucleotide Sequences
Protein Sequences
Transcriptome

Strain Variation

Strain Sequence Variants (Rnor 6.0)

Additional Information

External Database Links
Nomenclature History
 
More on Lhx9
Alliance Gene
NCBI Gene
Ensembl Gene
JBrowse: rn5 rn6
NCBI Genome Data Viewer

CRRD Object Information
CRRD ID: 727956
Created: 2003-11-05
Species: Rattus norvegicus
Last Modified: 2019-08-20
Status: ACTIVE



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RGD is funded by grant HL64541 from the National Heart, Lung, and Blood Institute on behalf of the NIH.