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Gene: SLC6A1 (solute carrier family 6 member 1) Homo sapiens
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Symbol: SLC6A1
Name: solute carrier family 6 member 1
Description: Predicted to have gamma-aminobutyric acid:sodium symporter activity and neurotransmitter binding activity. Predicted to be involved in taurine transport. Predicted to localize to the axon; cell surface; and plasma membrane. Biomarker of temporal lobe epilepsy.
Type: protein-coding
RefSeq Status: REVIEWED
Also known as: GABA transporter 1; gaba transporter protein; GABATHG; GABATR; GAT-1; GAT1; MAE; sodium- and chloride-dependent GABA transporter 1; solute carrier family 6 (neurotransmitter transporter), member 1; solute carrier family 6 (neurotransmitter transporter, GABA), member 1
Orthologs:
Mus musculus (house mouse) : Slc6a1 (solute carrier family 6 (neurotransmitter transporter, GABA), member 1)  MGI  Alliance
Rattus norvegicus (Norway rat) : Slc6a1 (solute carrier family 6 member 1)  Alliance
Chinchilla lanigera (long-tailed chinchilla) : Slc6a1 (solute carrier family 6 member 1)
Pan paniscus (bonobo/pygmy chimpanzee) : SLC6A1 (solute carrier family 6 member 1)
Canis lupus familiaris (dog) : SLC6A1 (solute carrier family 6 member 1)
Ictidomys tridecemlineatus (thirteen-lined ground squirrel) : Slc6a1 (solute carrier family 6 member 1)
Sus scrofa (pig) : SLC6A1 (solute carrier family 6 member 1)
Chlorocebus sabaeus (African green monkey) : SLC6A1 (solute carrier family 6 member 1)
Heterocephalus glaber (naked mole-rat) : Slc6a1 (solute carrier family 6 member 1)
more info ...
Allele / Splice: See ClinVar data
Latest Assembly: GRCh38 - Human Genome Assembly GRCh38
Position:
Human AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCh38 Ensembl310,992,186 - 11,039,247 (+)EnsemblGRCh38hg38GRCh38
GRCh38310,992,734 - 11,039,249 (+)NCBIGRCh38GRCh38hg38GRCh38
GRCh37311,034,420 - 11,080,935 (+)NCBIGRCh37GRCh37hg19GRCh37
Build 36311,009,453 - 11,055,935 (+)NCBINCBI36hg18NCBI36
Build 34311,009,455 - 11,055,934NCBI
Celera310,969,866 - 11,016,381 (+)NCBI
Cytogenetic Map3p25.3ENTREZGENE
HuRef310,969,346 - 11,015,750 (+)NCBIHuRef
CHM1_1310,984,449 - 11,030,960 (+)NCBICHM1_1
JBrowse: View Region in Genome Browser (JBrowse)
Model


Disease Annotations
Gene-Chemical Interaction Annotations
Gene Ontology Annotations
Phenotype Annotations
References - curated
References - uncurated

Genomics

Comparative Map Data
Position Markers
miRNA Target Status

Expression

RNA-SEQ Expression

Sequence

Nucleotide Sequences
Protein Sequences
Promoters
Clinical Variants

Additional Information

External Database Links
Nomenclature History
 
More on SLC6A1
Alliance Gene
NCBI Gene
Ensembl Gene
JBrowse: hg19 hg38
HGNC Report
NCBI Genome Data Viewer

CRRD Object Information
CRRD ID: 731475
Created: 2004-01-12
Species: Homo sapiens
Last Modified: 2020-03-24
Status: ACTIVE



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RGD is funded by grant HL64541 from the National Heart, Lung, and Blood Institute on behalf of the NIH.