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Gene: Capn9 (calpain 9) Mus musculus
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Symbol: Capn9
Name: calpain 9
Description: Predicted to have calcium-dependent cysteine-type endopeptidase activity. Predicted to be involved in sarcomere organization. Predicted to localize to the cytoplasm. Human ortholog(s) of this gene implicated in stomach cancer. Orthologous to human CAPN9 (calpain 9); INTERACTS WITH 17beta-estradiol; bisphenol A; carbon nanotube.
Type: protein-coding
RefSeq Status: VALIDATED
Also known as: 2200003B16Rik; calpain-9; digestive tract-specific calpain; GC36; nCL-4; nCL4; new calpain 4
Orthologs:
Homo sapiens (human) : CAPN9 (calpain 9)  HGNC  Alliance
Rattus norvegicus (Norway rat) : Capn9 (calpain 9)  Alliance
Chinchilla lanigera (long-tailed chinchilla) : Capn9 (calpain 9)
Pan paniscus (bonobo/pygmy chimpanzee) : CAPN9 (calpain 9)
Canis lupus familiaris (dog) : CAPN9 (calpain 9)
Ictidomys tridecemlineatus (thirteen-lined ground squirrel) : Capn9 (calpain 9)
Sus scrofa (pig) : CAPN9 (calpain 9)
Chlorocebus sabaeus (African green monkey) : CAPN9 (calpain 9)
Heterocephalus glaber (naked mole-rat) : Capn9 (calpain 9)
more info ...
Latest Assembly: GRCm38 - Mouse Genome Assembly GRCm38
Position:
Mouse AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCm38 Ensembl8124,576,111 - 124,618,731 (+)Ensembl
GRCm388124,576,062 - 124,618,731 (+)NCBIGRCm38GRCm38mm10GRCm38
MGSCv378127,100,011 - 127,142,631 (+)NCBIGRCm37mm9NCBIm37
MGSCv368127,462,201 - 127,504,812 (+)NCBImm8
Celera8128,879,934 - 128,916,531 (+)NCBICelera
Cytogenetic Map8 E2NCBI
JBrowse: View Region in Genome Browser (JBrowse)
Model


Disease Annotations
Gene-Chemical Interaction Annotations
Gene Ontology Annotations
Phenotype Annotations
References - curated
References - uncurated

Genomics

Comparative Map Data
QTLs in Region (GRCm38)
miRNA Target Status

Expression


Sequence

Nucleotide Sequences
Protein Sequences
Promoters

Additional Information

External Database Links
 
More on Capn9
Alliance Gene
NCBI Gene
Ensembl Gene
JBrowse: mm9 mm10
MGI Report
NCBI Genome Data Viewer

CRRD Object Information
CRRD ID: 731612
Created: 2004-01-12
Species: Mus musculus
Last Modified: 2019-11-27
Status: ACTIVE



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RGD is funded by grant HL64541 from the National Heart, Lung, and Blood Institute on behalf of the NIH.