Submit Data |  Help |  Video Tutorials |  News |  Publications |  FTP Download |  REST API |  Citing RGD |  Contact   
Gene: Col3a1 (collagen, type III, alpha 1) Mus musculus
Analyze
Symbol: Col3a1
Name: collagen, type III, alpha 1
Description: Exhibits SMAD binding activity. Involved in several processes, including aorta smooth muscle tissue morphogenesis; collagen fibril organization; and nervous system development. Localizes to collagen type III trimer. Used to study autosomal dominant type IV Ehlers-Danlos syndrome and systemic scleroderma. Human ortholog(s) of this gene implicated in Ehlers-Danlos syndrome; autosomal dominant type IV Ehlers-Danlos syndrome; end stage renal failure; and type III Ehlers-Danlos syndrome. Is expressed in several structures, including alimentary system; central nervous system; embryo mesenchyme; genitourinary system; and heart and pericardium. Orthologous to human COL3A1 (collagen type III alpha 1 chain).
Type: protein-coding
RefSeq Status: REVIEWED
Also known as: AW550625; Col3a-1; collagen alpha-1(III) chain; KIAA4231; minisatellite 10w detected by probe MMS10; mKIAA4231; MMS10-W; Ms10w; procollagen, type III, alpha 1; Tsk-2; Tsk2
Orthologs:
Homo sapiens (human) : COL3A1 (collagen type III alpha 1 chain)  HGNC  Alliance
Rattus norvegicus (Norway rat) : Col3a1 (collagen type III alpha 1 chain)  Alliance
Chinchilla lanigera (long-tailed chinchilla) : Col3a1 (collagen type III alpha 1 chain)
Pan paniscus (bonobo/pygmy chimpanzee) : COL3A1 (collagen type III alpha 1 chain)
Canis lupus familiaris (dog) : COL3A1 (collagen type III alpha 1 chain)
Ictidomys tridecemlineatus (thirteen-lined ground squirrel) : Col3a1 (collagen type III alpha 1 chain)
Sus scrofa (pig) : COL3A1 (collagen type III alpha 1 chain)
Chlorocebus sabaeus (African green monkey) : COL3A1 (collagen type III alpha 1 chain)
Heterocephalus glaber (naked mole-rat) : Col3a1 (collagen type III alpha 1 chain)
more info ...
Related Pseudogenes: Gm18395  
Latest Assembly: GRCm38 - Mouse Genome Assembly GRCm38
Position:
Mouse AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCm38 Ensembl145,311,538 - 45,349,706 (+)EnsemblGRCm38mm10GRCm38
GRCm38145,311,538 - 45,349,706 (+)NCBIGRCm38GRCm38mm10GRCm38
MGSCv37145,368,383 - 45,406,551 (+)NCBIGRCm37mm9NCBIm37
MGSCv36145,256,192 - 45,293,566 (+)NCBImm8
Celera145,612,466 - 45,650,861 (+)NCBICelera
Cytogenetic Map1C1.1NCBI
cM Map123.67NCBI
JBrowse: View Region in Genome Browser (JBrowse)
Model


Disease Annotations
Gene-Chemical Interaction Annotations
Gene Ontology Annotations
Molecular Pathway Annotations
References - curated
References - uncurated

Genomics

Comparative Map Data
Position Markers
QTLs in Region (GRCm38)
miRNA Target Status

Expression


Sequence

Nucleotide Sequences
Protein Sequences
Promoters

Additional Information

External Database Links
 
More on Col3a1
Alliance Gene
NCBI Gene
Ensembl Gene
JBrowse: mm9 mm10
MGI Report
NCBI Genome Data Viewer

CRRD Object Information
CRRD ID: 732584
Created: 2004-01-12
Species: Mus musculus
Last Modified: 2020-05-05
Status: ACTIVE



NHLBI Logo

RGD is funded by grant HL64541 from the National Heart, Lung, and Blood Institute on behalf of the NIH.