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Gene: BARHL1 (BarH like homeobox 1) Homo sapiens
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Symbol: BARHL1
Name: BarH like homeobox 1
Description: Predicted to have DNA-binding transcription activator activity, RNA polymerase II-specific and RNA polymerase II regulatory region sequence-specific DNA binding activity. Predicted to be involved in several processes, including nervous system development; regulation of transcription by RNA polymerase II; and tissue development. Predicted to localize to the nuclear chromatin. Biomarker of Alzheimer's disease; malignant glioma; and triple-receptor negative breast cancer; INTERACTS WITH (+)-catechin; 4-(N-nitrosomethylamino)-1-(3-pyridyl)butan-1-one; aflatoxin B1.
Type: protein-coding
RefSeq Status: VALIDATED
Also known as: barH-like 1 homeobox protein; BarH-like homeobox 1
Orthologs:
Mus musculus (house mouse) : Barhl1 (BarH like homeobox 1)  MGI  Alliance
Rattus norvegicus (Norway rat) : Barhl1 (BarH-like homeobox 1)  Alliance
Chinchilla lanigera (long-tailed chinchilla) : Barhl1 (BarH like homeobox 1)
Pan paniscus (bonobo/pygmy chimpanzee) : BARHL1 (BarH like homeobox 1)
Canis lupus familiaris (dog) : BARHL1 (BarH like homeobox 1)
Ictidomys tridecemlineatus (thirteen-lined ground squirrel) : Barhl1 (BarH like homeobox 1)
Sus scrofa (pig) : BARHL1 (BarH like homeobox 1)
more info ...
Allele / Splice: See ClinVar data
Latest Assembly: GRCh38 - Human Genome Assembly GRCh38
Position:
Human AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCh389132,582,606 - 132,590,252 (+)NCBIGRCh38GRCh38hg38GRCh38
GRCh379135,457,993 - 135,465,640 (+)NCBIGRCh37GRCh37hg19GRCh37
Build 369134,447,814 - 134,455,461 (+)NCBINCBI36hg18NCBI36
Build 349132,487,546 - 132,495,194NCBI
Celera9105,999,743 - 106,007,390 (+)NCBI
Cytogenetic Map9q34.13NCBI
HuRef9104,951,812 - 104,959,454 (+)NCBIHuRef
CHM1_19135,608,371 - 135,616,013 (+)NCBICHM1_1
JBrowse: View Region in Genome Browser (JBrowse)
Model


Disease Annotations
Gene-Chemical Interaction Annotations
Gene Ontology Annotations
References - curated
References - uncurated

Genomics

Comparative Map Data
miRNA Target Status

Expression


Sequence

Nucleotide Sequences
Protein Sequences
Promoters
Clinical Variants

Additional Information

External Database Links
Nomenclature History
 
More on BARHL1
Alliance Gene
NCBI Gene
Ensembl Gene
JBrowse: hg19 hg38
HGNC Report
NCBI Genome Data Viewer

CRRD Object Information
CRRD ID: 733588
Created: 2004-01-12
Species: Homo sapiens
Last Modified: 2019-11-26
Status: ACTIVE



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RGD is funded by grant HL64541 from the National Heart, Lung, and Blood Institute on behalf of the NIH.