Submit Data |  Help |  Video Tutorials |  News |  Publications |  FTP Download |  REST API |  Citing RGD |  Contact   
Gene: Sdc2 (syndecan 2) Mus musculus
Analyze
Symbol: Sdc2
Name: syndecan 2
Description: Predicted to have PDZ domain binding activity and identical protein binding activity. Involved in regulation of dendrite morphogenesis. Predicted to colocalize with the synapse. Human ortholog(s) of this gene implicated in cleft lip and cleft palate. Is expressed in several structures, including alimentary system; craniocervical region bone; embryo mesenchyme; genitourinary system; and retina layer. Orthologous to human SDC2 (syndecan 2); PARTICIPATES IN fibroblast growth factor signaling pathway; syndecan signaling pathway; cell-extracellular matrix signaling pathway; INTERACTS WITH 17alpha-ethynylestradiol; 2,3',4,4',5-Pentachlorobiphenyl; 2,3,7,8-tetrachlorodibenzodioxine.
Type: protein-coding
RefSeq Status: PROVISIONAL
Also known as: 4833414L08Rik; AA960457; fibroglycan; heparan sulfate proteoglycan 1, cell surface-associated (fibroglycan); heparan sulfate proteoglycan core protein; HSPG; Hspg1; Synd2; syndecan-2
Orthologs:
Homo sapiens (human) : SDC2 (syndecan 2)  HGNC  Alliance
Rattus norvegicus (Norway rat) : Sdc2 (syndecan 2)  Alliance
Chinchilla lanigera (long-tailed chinchilla) : Sdc2 (syndecan 2)
Pan paniscus (bonobo/pygmy chimpanzee) : SDC2 (syndecan 2)
Canis lupus familiaris (dog) : SDC2 (syndecan 2)
Ictidomys tridecemlineatus (thirteen-lined ground squirrel) : Sdc2 (syndecan 2)
Sus scrofa (pig) : SDC2 (syndecan 2)
Chlorocebus sabaeus (African green monkey) : SDC2 (syndecan 2)
Heterocephalus glaber (naked mole-rat) : Sdc2 (syndecan 2)
more info ...
Latest Assembly: GRCm38 - Mouse Genome Assembly GRCm38
Position:
Mouse AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCm38 Ensembl1532,920,723 - 33,034,935 (+)EnsemblGRCm38mm10GRCm38
GRCm381532,920,723 - 33,034,721 (+)NCBIGRCm38GRCm38mm10GRCm38
MGSCv371532,850,478 - 32,964,476 (+)NCBIGRCm37mm9NCBIm37
MGSCv361532,865,312 - 32,979,310 (+)NCBImm8
Celera1533,584,115 - 33,695,490 (+)NCBICelera
Cytogenetic Map15B3.1NCBI
cM Map1513.74NCBI
JBrowse: View Region in Genome Browser (JBrowse)
Model


Disease Annotations
Gene-Chemical Interaction Annotations
Gene Ontology Annotations
Molecular Pathway Annotations
Phenotype Annotations
References - curated
References - uncurated

Genomics

Comparative Map Data
Position Markers
QTLs in Region (GRCm38)
miRNA Target Status

Expression


Sequence

Nucleotide Sequences
Protein Sequences
Promoters

Additional Information

External Database Links
 
More on Sdc2
Alliance Gene
NCBI Gene
Ensembl Gene
JBrowse: mm9 mm10
MGI Report
NCBI Genome Data Viewer

CRRD Object Information
CRRD ID: 734387
Created: 2004-01-12
Species: Mus musculus
Last Modified: 2020-03-04
Status: ACTIVE



NHLBI Logo

RGD is funded by grant HL64541 from the National Heart, Lung, and Blood Institute on behalf of the NIH.