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Gene: Pcdha1 (protocadherin alpha 1) Rattus norvegicus
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Symbol: Pcdha1
Name: protocadherin alpha 1
Description: Predicted to localize to the endoplasmic reticulum and membrane. Orthologous to human PCDHA1 (protocadherin alpha 1); INTERACTS WITH 6-propyl-2-thiouracil; bisphenol A; diuron.
Type: protein-coding
RefSeq Status: PROVISIONAL
Also known as: cadherin-related neuronal receptor 1; LOC364840; protocadherin alpha-1; rCNRv01
Orthologs:
Homo sapiens (human) : PCDHA1 (protocadherin alpha 1)  HGNC  Alliance
Mus musculus (house mouse) : Pcdha1 (protocadherin alpha 1)  MGI  Alliance
more info ...
Latest Assembly: Rnor_6.0 - RGSC Genome Assembly v6.0
NCBI Annotation Information: Genome Annotation Status: not in current annotation release
Position:
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Rnor_6.01829,951,094 - 30,215,896 (+)NCBIRnor6.0Rnor_6.0rn6Rnor6.0
Rnor_5.01829,648,344 - 29,924,443 (+)NCBIRnor5.0Rnor_5.0rn5Rnor5.0
RGSC_v3.41829,661,560 - 29,928,030 (+)NCBIRGSC3.4rn4RGSC3.4
RGSC_v3.11829,688,205 - 29,954,676 (+)NCBI
Celera1828,289,927 - 28,552,754 (+)NCBICelera
Cytogenetic Map18p11NCBI
JBrowse: View Region in Genome Browser (JBrowse)
Model


Disease Annotations
Gene-Chemical Interaction Annotations
Gene Ontology Annotations
References - curated
References - uncurated

Genomics

Comparative Map Data
Position Markers
QTLs in Region (Rnor_6.0)

Sequence

Nucleotide Sequences
Protein Sequences

Strain Variation

Strain Sequence Variants (Rnor 6.0)
Damaging Variants

Additional Information

External Database Links
Nomenclature History
 
More on Pcdha1
Alliance Gene
NCBI Gene
Ensembl Gene
JBrowse: rn5 rn6
NCBI Genome Data Viewer

CRRD Object Information
CRRD ID: 735016
Created: 2004-02-05
Species: Rattus norvegicus
Last Modified: 2019-08-20
Status: ACTIVE



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RGD is funded by grant HL64541 from the National Heart, Lung, and Blood Institute on behalf of the NIH.