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Gene: Rdh16 (retinol dehydrogenase 16) Rattus norvegicus
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Symbol: Rdh16
Name: retinol dehydrogenase 16
Description: Exhibits retinol dehydrogenase activity. Involved in positive regulation of retinoic acid biosynthetic process; retinoic acid metabolic process; and retinol metabolic process. Localizes to the endoplasmic reticulum membrane and integral component of organelle membrane. Orthologous to human RDH16 (retinol dehydrogenase 16); PARTICIPATES IN retinoic acid metabolic pathway; retinol metabolic pathway; vitamin A deficiency pathway; INTERACTS WITH 17beta-hydroxy-5alpha-androstan-3-one; 2,3,7,8-tetrachlorodibenzodioxine; ammonium chloride.
Type: protein-coding
RefSeq Status: PROVISIONAL
Also known as: 29 kDa protein; Rdh2; retinol dehydrogenase 16 (all-trans); retinol dehydrogenase 2; retinol dehydrogenase 2-like; retinol dehydrogenase type 1; retinol dehydrogenase type 2; retinol dehydrogenase type II (RODH II); RODH II; RoDHII
Orthologs:
Homo sapiens (human) : RDH16 (retinol dehydrogenase 16)  HGNC  Alliance
Mus musculus (house mouse) : Rdh16 (retinol dehydrogenase 16)  MGI  Alliance
Canis lupus familiaris (dog) : RDH16 (retinol dehydrogenase 16)
Ictidomys tridecemlineatus (thirteen-lined ground squirrel) : Rdh16 (retinol dehydrogenase 16)
Sus scrofa (pig) : LOC100512656 (retinol dehydrogenase 16)
more info ...
Latest Assembly: Rnor_6.0 - RGSC Genome Assembly v6.0
NCBI Annotation Information: Annotation category: partial on reference assembly
Position:
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Rnor_6.0771,058,150 - 71,072,685 (+)NCBIRnor6.0Rnor_6.0rn6Rnor6.0
Rnor_5.0771,151,962 - 71,152,405 (+)NCBIRnor5.0Rnor_5.0rn5Rnor5.0
RGSC_v3.4767,752,257 - 67,766,995 (+)NCBIRGSC3.4rn4RGSC3.4
RGSC_v3.1767,772,988 - 67,787,725 (+)NCBI
Celera754,092,966 - 54,096,444 (-)NCBICelera
Cytogenetic Map7q22NCBI
JBrowse: View Region in Genome Browser (JBrowse)
Model


Gene-Chemical Interaction Annotations
Gene Ontology Annotations
Molecular Pathway Annotations
References - curated
References - uncurated

Genomics

Candidate Gene Status
Comparative Map Data
QTLs in Region (Rnor_6.0)
miRNA Target Status

Sequence

Nucleotide Sequences
Protein Sequences
Transcriptome
Promoters

Strain Variation

Strain Sequence Variants (Rnor 5.0)

Additional Information

External Database Links
Nomenclature History
RGD Curation Notes
 
More on Rdh16
Alliance Gene
NCBI Gene
Ensembl Gene
JBrowse: rn5 rn6
NCBI Genome Data Viewer

CRRD Object Information
CRRD ID: 735050
Created: 2004-02-05
Species: Rattus norvegicus
Last Modified: 2019-04-23
Status: ACTIVE



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RGD is funded by grant HL64541 from the National Heart, Lung, and Blood Institute on behalf of the NIH.