Submit Data |  Help |  Video Tutorials |  News |  Publications |  FTP Download |  REST API |  Citing RGD |  Contact   
Gene: Pcdha7 (protocadherin alpha 7) Rattus norvegicus
Analyze
Symbol: Pcdha7
Name: protocadherin alpha 7
Description: Predicted to have calcium ion binding activity and identical protein binding activity. Predicted to be involved in cell-cell recognition and homophilic cell adhesion via plasma membrane adhesion molecules. Predicted to localize to the integral component of plasma membrane. Orthologous to human PCDHA7 (protocadherin alpha 7); INTERACTS WITH ammonium chloride; trichloroethene; 2,3,7,8-tetrachlorodibenzodioxine (ortholog).
Type: protein-coding
RefSeq Status: PROVISIONAL
Also known as: cadherin-related neuronal receptor 7; protocadherin alpha-7; rCNRv07
Orthologs:
Homo sapiens (human) : PCDHA7 (protocadherin alpha 7)  HGNC  Alliance
Mus musculus (house mouse) : Pcdha7 (protocadherin alpha 7)  MGI  Alliance
Pan paniscus (bonobo/pygmy chimpanzee) : LOC100995259 (protocadherin alpha-7)
Sus scrofa (pig) : LOC102160218 (protocadherin alpha-7)
more info ...
Latest Assembly: Rnor_6.0 - RGSC Genome Assembly v6.0
NCBI Annotation Information: Genome Annotation Status: not in current annotation release
Position:
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Rnor_6.01829,993,361 - 30,215,896 (+)NCBIRnor6.0Rnor_6.0rn6Rnor6.0
Rnor_6.0 Ensembl1829,987,206 - 30,215,897 (+)Ensembl
Rnor_5.01829,690,611 - 29,924,443 (+)NCBIRnor5.0Rnor_5.0rn5Rnor5.0
RGSC_v3.41829,704,031 - 29,928,030 (+)NCBIRGSC3.4rn4RGSC3.4
RGSC_v3.11829,730,676 - 29,954,676 (+)NCBI
Celera1828,332,194 - 28,552,754 (+)NCBICelera
Cytogenetic Map18p11NCBI
JBrowse: View Region in Genome Browser (JBrowse)
Model


Disease Annotations
Gene-Chemical Interaction Annotations
Gene Ontology Annotations
References - curated
References - uncurated

Genomics

Comparative Map Data
Position Markers
QTLs in Region (Rnor_6.0)

Expression


Sequence

Nucleotide Sequences
Protein Sequences
Transcriptome

Strain Variation

Strain Sequence Variants (Rnor 6.0)
Damaging Variants

Additional Information

External Database Links
Nomenclature History
RGD Curation Notes
 
More on Pcdha7
Alliance Gene
NCBI Gene
Ensembl Gene
JBrowse: rn5 rn6
NCBI Genome Data Viewer

CRRD Object Information
CRRD ID: 735055
Created: 2004-02-05
Species: Rattus norvegicus
Last Modified: 2019-11-27
Status: ACTIVE



NHLBI Logo

RGD is funded by grant HL64541 from the National Heart, Lung, and Blood Institute on behalf of the NIH.