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Gene: Cry1 (cryptochrome circadian regulator 1) Rattus norvegicus
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Symbol: Cry1
Name: cryptochrome circadian regulator 1
Description: Predicted to have E-box binding activity; enzyme binding activity; and nuclear hormone receptor binding activity. Predicted to be involved in several processes, including negative regulation of cell communication; regulation of protein ubiquitination; and response to peptide hormone. Predicted to localize to the mitochondrion and nucleus. Human ortholog(s) of this gene implicated in advanced sleep phase syndrome. Orthologous to human CRY1 (cryptochrome circadian regulator 1); INTERACTS WITH 2,3,7,8-tetrachlorodibenzodioxine; 2,4-dinitrotoluene; 3-chloropropane-1,2-diol.
Type: protein-coding
RefSeq Status: PROVISIONAL
Also known as: cryptochrome 1 (photolyase-like); cryptochrome circadian clock 1; cryptochrome-1; MGC124541
Orthologs:
Homo sapiens (human) : CRY1 (cryptochrome circadian regulator 1)  HGNC  Alliance
Mus musculus (house mouse) : Cry1 (cryptochrome 1 (photolyase-like))  MGI  Alliance
Chinchilla lanigera (long-tailed chinchilla) : Cry1 (cryptochrome circadian regulator 1)
Pan paniscus (bonobo/pygmy chimpanzee) : CRY1 (cryptochrome circadian regulator 1)
Canis lupus familiaris (dog) : CRY1 (cryptochrome circadian regulator 1)
Ictidomys tridecemlineatus (thirteen-lined ground squirrel) : Cry1 (cryptochrome circadian regulator 1)
Sus scrofa (pig) : CRY1 (cryptochrome circadian regulator 1)
more info ...
Latest Assembly: Rnor_6.0 - RGSC Genome Assembly v6.0
Position:
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Rnor_6.0724,534,593 - 24,634,098 (+)NCBIRnor6.0Rnor_6.0rn6Rnor6.0
Rnor_5.0726,277,264 - 26,278,124 (-)NCBIRnor5.0Rnor_5.0rn5Rnor5.0
Rnor_5.0724,684,038 - 24,784,329 (+)NCBIRnor5.0Rnor_5.0rn5Rnor5.0
RGSC_v3.4720,643,879 - 20,709,216 (+)NCBIRGSC3.4rn4RGSC3.4
RGSC_v3.1720,664,607 - 20,729,486 (+)NCBI
Celera715,758,113 - 15,822,171 (+)NCBICelera
Cytogenetic Map7q13NCBI
JBrowse: View Region in Genome Browser (JBrowse)
Model


Disease Annotations
Gene-Chemical Interaction Annotations
Gene Ontology Annotations
References - curated
References - uncurated

Genomics

Comparative Map Data
Position Markers
QTLs in Region (Rnor_6.0)
miRNA Target Status

Sequence

Nucleotide Sequences
Protein Sequences
Transcriptome
Promoters

Strain Variation

Strain Sequence Variants (Rnor 6.0)

Additional Information

External Database Links
Nomenclature History
 
More on Cry1
Alliance Gene
NCBI Gene
Ensembl Gene
JBrowse: rn5 rn6
NCBI Genome Data Viewer

CRRD Object Information
CRRD ID: 735083
Created: 2004-02-05
Species: Rattus norvegicus
Last Modified: 2019-10-16
Status: ACTIVE



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RGD is funded by grant HL64541 from the National Heart, Lung, and Blood Institute on behalf of the NIH.