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Gene: Hp1bp3 (heterochromatin protein 1, binding protein 3) Rattus norvegicus
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Symbol: Hp1bp3
Name: heterochromatin protein 1, binding protein 3
Description: Predicted to have DNA binding activity and nucleosome binding activity. Predicted to be involved in several processes, including cellular response to hypoxia; heterochromatin organization; and regulation of nucleus size. Predicted to localize to chromosome and nuclear speck. Orthologous to human HP1BP3 (heterochromatin protein 1 binding protein 3); INTERACTS WITH bisphenol A; Brodifacoum; dibutyl phthalate.
Type: protein-coding
RefSeq Status: PROVISIONAL
Also known as: heterochromatin protein 1-binding protein 3; MGC72624; Unknown (protein for MGC:72624)
Orthologs:
Homo sapiens (human) : HP1BP3 (heterochromatin protein 1 binding protein 3)  HGNC  Alliance
Mus musculus (house mouse) : Hp1bp3 (heterochromatin protein 1, binding protein 3)  MGI  Alliance
Chinchilla lanigera (long-tailed chinchilla) : Hp1bp3 (heterochromatin protein 1 binding protein 3)
Pan paniscus (bonobo/pygmy chimpanzee) : HP1BP3 (heterochromatin protein 1 binding protein 3)
Canis lupus familiaris (dog) : HP1BP3 (heterochromatin protein 1 binding protein 3)
Ictidomys tridecemlineatus (thirteen-lined ground squirrel) : Hp1bp3 (heterochromatin protein 1 binding protein 3)
Sus scrofa (pig) : HP1BP3 (heterochromatin protein 1 binding protein 3)
Chlorocebus sabaeus (African green monkey) : HP1BP3 (heterochromatin protein 1 binding protein 3)
Heterocephalus glaber (naked mole-rat) : Hp1bp3 (heterochromatin protein 1 binding protein 3)
more info ...
Latest Assembly: Rnor_6.0 - RGSC Genome Assembly v6.0
NCBI Annotation Information: Annotation category: partial on reference assembly
Position:
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Rnor_6.05156,581,732 - 156,609,059 (+)NCBIRnor6.0Rnor_6.0rn6Rnor6.0
Rnor_6.0 Ensembl5156,581,732 - 156,609,059 (+)EnsemblRnor6.0rn6Rnor6.0
Rnor_5.05160,331,116 - 160,358,541 (+)NCBIRnor5.0Rnor_5.0rn5Rnor5.0
RGSC_v3.45156,996,670 - 157,024,045 (+)NCBIRGSC3.4rn4RGSC3.4
RGSC_v3.15157,006,708 - 157,034,082 (+)NCBI
Celera5148,829,677 - 148,857,023 (+)NCBICelera
Cytogenetic Map5q36NCBI
JBrowse: View Region in Genome Browser (JBrowse)
Model


Gene-Chemical Interaction Annotations
Gene Ontology Annotations
References - curated
References - uncurated

Genomics

Comparative Map Data
Position Markers
QTLs in Region (Rnor_6.0)
miRNA Target Status

Expression

RNA-SEQ Expression

Sequence

Nucleotide Sequences
Protein Sequences
Transcriptome
Promoters

Strain Variation

Strain Sequence Variants (Rnor 6.0)

Additional Information

External Database Links
Nomenclature History
 
More on Hp1bp3
Alliance Gene
NCBI Gene
Ensembl Gene
JBrowse: rn5 rn6
NCBI Genome Data Viewer

CRRD Object Information
CRRD ID: 735099
Created: 2004-02-05
Species: Rattus norvegicus
Last Modified: 2020-06-09
Status: ACTIVE



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RGD is funded by grant HL64541 from the National Heart, Lung, and Blood Institute on behalf of the NIH.