Submit Data |  Help |  Video Tutorials |  News |  Publications |  FTP Download |  REST API |  Citing RGD |  Contact   
Gene: Plekha4 (pleckstrin homology domain containing A4) Rattus norvegicus
Analyze
Symbol: Plekha4
Name: pleckstrin homology domain containing A4
Description: Predicted to have phosphatidylinositol phosphate binding activity. Predicted to be involved in positive regulation of Wnt signaling pathway, planar cell polarity pathway and positive regulation of canonical Wnt signaling pathway. Predicted to localize to extrinsic component of cytoplasmic side of plasma membrane. Orthologous to human PLEKHA4 (pleckstrin homology domain containing A4); INTERACTS WITH 2,3,7,8-tetrachlorodibenzodioxine; 2,4-dinitrotoluene; 6-propyl-2-thiouracil.
Type: protein-coding
RefSeq Status: PROVISIONAL
Also known as: MGC72599; PEPP-1; PH domain-containing family A member 4; phosphoinositol 3-phosphate-binding protein 1; pleckstrin homology domain containing family A member 4; pleckstrin homology domain containing, family A (phosphoinositide binding specific) member 4; pleckstrin homology domain-containing family A member 4
Orthologs:
Homo sapiens (human) : PLEKHA4 (pleckstrin homology domain containing A4)  HGNC  Alliance
Mus musculus (house mouse) : Plekha4 (pleckstrin homology domain containing, family A (phosphoinositide binding specific) member 4)  MGI  Alliance
Chinchilla lanigera (long-tailed chinchilla) : Plekha4 (pleckstrin homology domain containing A4)
Pan paniscus (bonobo/pygmy chimpanzee) : PLEKHA4 (pleckstrin homology domain containing A4)
Canis lupus familiaris (dog) : PLEKHA4 (pleckstrin homology domain containing A4)
Ictidomys tridecemlineatus (thirteen-lined ground squirrel) : Plekha4 (pleckstrin homology domain containing A4)
Sus scrofa (pig) : PLEKHA4 (pleckstrin homology domain containing A4)
Chlorocebus sabaeus (African green monkey) : PLEKHA4 (pleckstrin homology domain containing A4)
Heterocephalus glaber (naked mole-rat) : Plekha4 (pleckstrin homology domain containing A4)
more info ...
Latest Assembly: Rnor_6.0 - RGSC Genome Assembly v6.0
Position:
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Rnor_6.01101,517,702 - 101,540,802 (+)NCBIRnor6.0Rnor_6.0rn6Rnor6.0
Rnor_6.0 Ensembl1101,517,714 - 101,540,802 (+)EnsemblRnor6.0rn6Rnor6.0
Rnor_5.01102,596,518 - 102,619,582 (+)NCBIRnor5.0Rnor_5.0rn5Rnor5.0
RGSC_v3.4196,000,020 - 96,024,447 (+)NCBIRGSC3.4rn4RGSC3.4
RGSC_v3.1196,078,130 - 96,102,558 (+)NCBI
Celera190,261,747 - 90,284,341 (+)NCBICelera
Cytogenetic Map1q22NCBI
JBrowse: View Region in Genome Browser (JBrowse)
Model


References - curated
References - uncurated

Genomics

Comparative Map Data
QTLs in Region (Rnor_6.0)
miRNA Target Status

Expression

RNA-SEQ Expression

Sequence

Nucleotide Sequences
Protein Sequences
Transcriptome
Promoters

Strain Variation

Strain Sequence Variants (Rnor 6.0)
Damaging Variants

Additional Information

External Database Links
Nomenclature History
 
More on Plekha4
Alliance Gene
NCBI Gene
Ensembl Gene
JBrowse: rn5 rn6
NCBI Genome Data Viewer

CRRD Object Information
CRRD ID: 735133
Created: 2004-02-05
Species: Rattus norvegicus
Last Modified: 2020-05-05
Status: ACTIVE



NHLBI Logo

RGD is funded by grant HL64541 from the National Heart, Lung, and Blood Institute on behalf of the NIH.