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Gene: Gpcpd1 (glycerophosphocholine phosphodiesterase 1) Rattus norvegicus
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Symbol: Gpcpd1
Name: glycerophosphocholine phosphodiesterase 1
Description: Predicted to have glycerophosphocholine phosphodiesterase activity. Predicted to be involved in glycerophospholipid catabolic process and skeletal muscle tissue development. Predicted to localize to the cytoplasm. Orthologous to human GPCPD1 (glycerophosphocholine phosphodiesterase 1); INTERACTS WITH (S)-10-[(DIMETHYLAMINO)METHYL]-4-ETHYL-4,9-DIHYDROXY-1H-PYRANO[3',4':6,7]INOLIZINO[1,2-B]-QUINOLINE-3,14(4H,12H)-DIONE; 2,3,7,8-tetrachlorodibenzodioxine; 3,3',5-triiodo-L-thyronine.
Type: protein-coding
RefSeq Status: PROVISIONAL
Also known as: Gde5; glycerophosphocholine phosphodiesterase GDE1 homolog; glycerophosphocholine phosphodiesterase GDE1 homolog (S. cerevisiae); glycerophosphocholine phosphodiesterase GPCPD1; glycerophosphodiester phosphodiesterase 5; hypothetical protein LK44; LOC362219; Prei4; preimplantation protein 4; putative glycerophosphocholine phosphodiesterase GPCPD1; putative glycerophosphodiester phosphodiesterase 5; RGD735140
Orthologs:
Homo sapiens (human) : GPCPD1 (glycerophosphocholine phosphodiesterase 1)  HGNC  Alliance
Mus musculus (house mouse) : Gpcpd1 (glycerophosphocholine phosphodiesterase 1)  MGI  Alliance
Chinchilla lanigera (long-tailed chinchilla) : Gpcpd1 (glycerophosphocholine phosphodiesterase 1)
Pan paniscus (bonobo/pygmy chimpanzee) : GPCPD1 (glycerophosphocholine phosphodiesterase 1)
Canis lupus familiaris (dog) : GPCPD1 (glycerophosphocholine phosphodiesterase 1)
Ictidomys tridecemlineatus (thirteen-lined ground squirrel) : Gpcpd1 (glycerophosphocholine phosphodiesterase 1)
Sus scrofa (pig) : GPCPD1 (glycerophosphocholine phosphodiesterase 1)
more info ...
Latest Assembly: Rnor_6.0 - RGSC Genome Assembly v6.0
Position:
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Rnor_6.03125,169,131 - 125,213,598 (-)NCBIRnor6.0Rnor_6.0rn6Rnor6.0
Rnor_5.03131,661,587 - 131,706,004 (-)NCBIRnor5.0Rnor_5.0rn5Rnor5.0
RGSC_v3.43120,301,433 - 120,347,942 (-)NCBIRGSC3.4rn4RGSC3.4
RGSC_v3.13120,207,009 - 120,253,515 (-)NCBI
Celera3118,577,563 - 118,640,064 (-)NCBICelera
Cytogenetic Map3q36NCBI
JBrowse: View Region in Genome Browser (JBrowse)
Model


Disease Annotations
Gene-Chemical Interaction Annotations
Gene Ontology Annotations
References - curated
References - uncurated

Genomics

Comparative Map Data
Position Markers
QTLs in Region (Rnor_6.0)
miRNA Target Status

Sequence

Nucleotide Sequences
Protein Sequences
Transcriptome
Promoters

Strain Variation

Strain Sequence Variants (Rnor 6.0)

Additional Information

External Database Links
Nomenclature History
 
More on Gpcpd1
Alliance Gene
NCBI Gene
Ensembl Gene
JBrowse: rn5 rn6
NCBI Genome Data Viewer

CRRD Object Information
CRRD ID: 735140
Created: 2004-02-05
Species: Rattus norvegicus
Last Modified: 2019-08-20
Status: ACTIVE



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RGD is funded by grant HL64541 from the National Heart, Lung, and Blood Institute on behalf of the NIH.