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Gene: Sh3rf1 (SH3 domain containing ring finger 1) Rattus norvegicus
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Symbol: Sh3rf1
Name: SH3 domain containing ring finger 1
Description: Predicted to have MAP-kinase scaffold activity and ubiquitin protein ligase activity. Predicted to be involved in several processes, including negative regulation of apoptotic process; protein autoubiquitination; and regulation of alpha-beta T cell activation. Predicted to localize to cytosol and lamellipodium. Orthologous to human SH3RF1 (SH3 domain containing ring finger 1); INTERACTS WITH 17beta-estradiol; 3,3',4,4',5-pentachlorobiphenyl; bisphenol A.
Type: protein-coding
RefSeq Status: PROVISIONAL
Also known as: E3 ubiquitin-protein ligase SH3RF1; LOC306417; plenty of SH3s; Posh; putative E3 ubiquitin-protein ligase SH3RF1; putative scaffolding protein POSH; RING-type E3 ubiquitin transferase SH3RF1; SH3 domain-containing RING finger protein 1; SH3 multiple domains protein 2; Sh3md2
Orthologs:
Homo sapiens (human) : SH3RF1 (SH3 domain containing ring finger 1)  HGNC  Alliance
Mus musculus (house mouse) : Sh3rf1 (SH3 domain containing ring finger 1)  MGI  Alliance
Chinchilla lanigera (long-tailed chinchilla) : Sh3rf1 (SH3 domain containing ring finger 1)
Pan paniscus (bonobo/pygmy chimpanzee) : SH3RF1 (SH3 domain containing ring finger 1)
Canis lupus familiaris (dog) : SH3RF1 (SH3 domain containing ring finger 1)
Ictidomys tridecemlineatus (thirteen-lined ground squirrel) : Sh3rf1 (SH3 domain containing ring finger 1)
Sus scrofa (pig) : SH3RF1 (SH3 domain containing ring finger 1)
Chlorocebus sabaeus (African green monkey) : SH3RF1 (SH3 domain containing ring finger 1)
Heterocephalus glaber (naked mole-rat) : Sh3rf1 (SH3 domain containing ring finger 1)
more info ...
Latest Assembly: Rnor_6.0 - RGSC Genome Assembly v6.0
Position:
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Rnor_6.01632,062,425 - 32,227,526 (-)NCBIRnor6.0Rnor_6.0rn6Rnor6.0
Rnor_6.0 Ensembl1632,062,336 - 32,227,491 (-)EnsemblRnor6.0rn6Rnor6.0
Rnor_5.01631,898,366 - 32,062,432 (-)NCBIRnor5.0Rnor_5.0rn5Rnor5.0
RGSC_v3.41632,054,773 - 32,215,987 (-)NCBIRGSC3.4rn4RGSC3.4
RGSC_v3.11632,054,847 - 32,216,062 (-)NCBI
Celera1628,732,907 - 28,894,614 (-)NCBICelera
Cytogenetic Map16p12NCBI
JBrowse: View Region in Genome Browser (JBrowse)
Model


Gene-Chemical Interaction Annotations
Gene Ontology Annotations
References - curated
References - uncurated

Genomics

Comparative Map Data
Position Markers
QTLs in Region (Rnor_6.0)
miRNA Target Status

Expression

RNA-SEQ Expression

Sequence

Nucleotide Sequences
Protein Sequences
Transcriptome
Promoters

Strain Variation

Strain Sequence Variants (Rnor 6.0)

Additional Information

External Database Links
Nomenclature History
 
More on Sh3rf1
Alliance Gene
NCBI Gene
Ensembl Gene
JBrowse: rn5 rn6
NCBI Genome Data Viewer

CRRD Object Information
CRRD ID: 735154
Created: 2004-02-05
Species: Rattus norvegicus
Last Modified: 2020-06-09
Status: ACTIVE



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RGD is funded by grant HL64541 from the National Heart, Lung, and Blood Institute on behalf of the NIH.