Gene: Snap47 (synaptosome associated protein 47) Rattus norvegicus
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Symbol: Snap47
Name: synaptosome associated protein 47
Description: Predicted to have SNAP receptor activity and syntaxin binding activity; predicted to be involved in long-term synaptic potentiation and secretion by cell; localizes to the hippocampal mossy fiber to CA3 synapse and postsynaptic density; predicted to colocalize with the BLOC-1 complex; orthologous to human SNAP47 (synaptosome associated protein 47); INTERACTS WITH bisphenol A; aflatoxin B1 (ortholog); aflatoxin B2 (ortholog).
Type: protein-coding
RefSeq Status: PROVISIONAL
Also known as: MGC72593; RGD735194; similar to RIKEN cDNA 1110031B06; SNAP-47; synaptosomal-associated 47 kDa protein; synaptosomal-associated protein 47; synaptosomal-associated protein, 47
Orthologs:
Homo sapiens (human) : SNAP47 (synaptosome associated protein 47)  HGNC  Alliance
Mus musculus (house mouse) : Snap47 (synaptosomal-associated protein, 47)  MGI  Alliance
Chinchilla lanigera (long-tailed chinchilla) : Snap47 (synaptosome associated protein 47)
Pan paniscus (bonobo/pygmy chimpanzee) : SNAP47 (synaptosome associated protein 47)
Canis lupus familiaris (dog) : SNAP47 (synaptosome associated protein 47)
Ictidomys tridecemlineatus (thirteen-lined ground squirrel) : Snap47 (synaptosome associated protein 47)
Sus scrofa (pig) : SNAP47 (synaptosome associated protein 47)
more info ...
Latest Assembly: Rnor_6.0 - RGSC Genome Assembly v6.0
Position:
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Rnor_6.01045,757,196 - 45,798,734 (-)NCBIRnor6.0Rnor_6.0rn6Rnor6.0
Rnor_5.01045,512,870 - 45,554,413 (-)NCBIRnor5.0Rnor_5.0rn5Rnor5.0
RGSC_v3.41045,712,924 - 45,754,443 (-)NCBIRGSC3.4rn4RGSC3.4
RGSC_v3.11045,726,547 - 45,768,066 (-)NCBI
Celera1043,454,703 - 43,496,156 (-)NCBICelera
Cytogenetic Map10q22NCBI
JBrowse: View Region in Genome Browser (JBrowse)
Model


References - curated
References - uncurated

Genomics

Comparative Map Data
QTLs in Region (Rnor_6.0)
miRNA Target Status

Sequence

Nucleotide Sequences
Protein Sequences
Transcriptome
Promoters

Strain Variation

Strain Sequence Variants (Rnor 5.0)

Additional Information

External Database Links
Nomenclature History
 
More on Snap47
Alliance Gene
NCBI Gene
Ensembl Gene
JBrowse: rn5 rn6
NCBI Genome Data Viewer

CRRD Object Information
CRRD ID: 735194
Created: 2004-02-05
Species: Rattus norvegicus
Last Modified: 2019-04-23
Status: ACTIVE



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RGD is funded by grant HL64541 from the National Heart, Lung, and Blood Institute on behalf of the NIH.