Submit Data |  Help |  Video Tutorials |  News |  Publications |  FTP Download |  REST API |  Citing RGD |  Contact   
Gene: Chrdl1 (chordin-like 1) Rattus norvegicus
Analyze
Symbol: Chrdl1
Name: chordin-like 1
Description: Involved in cell fate determination and neuron differentiation. Predicted to localize to the extracellular region. Human ortholog(s) of this gene implicated in megalocornea. Orthologous to human CHRDL1 (chordin like 1); PARTICIPATES IN Bone morphogenetic proteins signaling pathway; INTERACTS WITH 3,7-dihydropurine-6-thione; 6-propyl-2-thiouracil; acrylamide.
Type: protein-coding
RefSeq Status: PROVISIONAL
Also known as: chordin-like protein 1; Kjr; kohjirin; neuralin-1; neurogenesin 1; Neurogenesin-1; Ng1; ventroptin
Orthologs:
Homo sapiens (human) : CHRDL1 (chordin like 1)  HGNC  Alliance
Mus musculus (house mouse) : Chrdl1 (chordin-like 1)  MGI  Alliance
Chinchilla lanigera (long-tailed chinchilla) : Chrdl1 (chordin like 1)
Pan paniscus (bonobo/pygmy chimpanzee) : CHRDL1 (chordin like 1)
Canis lupus familiaris (dog) : CHRDL1 (chordin like 1)
Ictidomys tridecemlineatus (thirteen-lined ground squirrel) : Chrdl1 (chordin like 1)
Sus scrofa (pig) : CHRDL1 (chordin like 1)
more info ...
Latest Assembly: Rnor_6.0 - RGSC Genome Assembly v6.0
Position:
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Rnor_6.0X114,554,359 - 114,658,975 (-)NCBIRnor6.0Rnor_6.0rn6Rnor6.0
Rnor_5.0X112,998,868 - 113,103,004 (-)NCBIRnor5.0Rnor_5.0rn5Rnor5.0
RGSC_v3.4X35,143,324 - 35,246,363 (+)NCBIRGSC3.4rn4RGSC3.4
RGSC_v3.1X35,196,792 - 35,299,832 (+)NCBI
CeleraX106,298,521 - 106,402,293 (-)NCBICelera
Cytogenetic MapXq33NCBI
JBrowse: View Region in Genome Browser (JBrowse)
Model


Disease Annotations
Gene-Chemical Interaction Annotations
Gene Ontology Annotations
Molecular Pathway Annotations
References - curated
References - uncurated

Genomics

Comparative Map Data
Position Markers
QTLs in Region (Rnor_6.0)
miRNA Target Status

Sequence

Nucleotide Sequences
Protein Sequences
Transcriptome

Strain Variation

Strain Sequence Variants (Rnor 6.0)
Damaging Variants

Additional Information

External Database Links
Nomenclature History
 
More on Chrdl1
Alliance Gene
NCBI Gene
Ensembl Gene
JBrowse: rn5 rn6
NCBI Genome Data Viewer

CRRD Object Information
CRRD ID: 735215
Created: 2004-02-05
Species: Rattus norvegicus
Last Modified: 2019-08-20
Status: ACTIVE



NHLBI Logo

RGD is funded by grant HL64541 from the National Heart, Lung, and Blood Institute on behalf of the NIH.