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Gene: FOXE1 (forkhead box E1) Homo sapiens
Symbol: FOXE1
Name: forkhead box E1
Description: Exhibits DNA-binding transcription factor activity, RNA polymerase II-specific and sequence-specific DNA binding activity. Involved in several processes, including gland development; hard palate development; and regulation of transcription, DNA-templated. Localizes to the nucleus. Implicated in Bamforth-Lazarus syndrome and thyroid gland papillary carcinoma.
Type: protein-coding
RefSeq Status: REVIEWED
Also known as: FKHL15; forkhead box E2; forkhead box protein E1; forkhead box protein E2; forkhead, drosophila, homolog-like 15; forkhead-related protein FKHL15; FOXE2; HFKH4; HFKL5; HNF-3/fork head-like protein 5; NMTC4; thyroid transcription factor 2; TITF2; TTF-2; TTF2
Mus musculus (house mouse) : Foxe1 (forkhead box E1)  MGI  Alliance
Rattus norvegicus (Norway rat) : Foxe1 (forkhead box E1)  Alliance
Chinchilla lanigera (long-tailed chinchilla) : Foxe1 (forkhead box E1)
Pan paniscus (bonobo/pygmy chimpanzee) : FOXE1 (forkhead box E1)
Canis lupus familiaris (dog) : FOXE1 (forkhead box E1)
Ictidomys tridecemlineatus (thirteen-lined ground squirrel) : Foxe1 (forkhead box E1)
Sus scrofa (pig) : FOXE1 (forkhead box E1)
more info ...
Allele / Splice: See ClinVar data
Latest Assembly: GRCh38 - Human Genome Assembly GRCh38
NCBI Annotation Information: Note: TTF2 (Gene ID: 8458) and FOXE1 (Gene ID: 2304) share the TTF2 symbol/alias in common. TTF2 is a widely used alternative name for forkhead box E1 (FOXE1), which can be confused with the official symbol for transcription termination factor 2 (TTF2). [31 May 2018]
Human AssemblyChrPosition (strand)SourceGenome Browsers
GRCh38997,853,226 - 97,856,717 (+)NCBIGRCh38GRCh38hg38GRCh38
GRCh379100,615,537 - 100,618,997 (+)NCBIGRCh37GRCh37hg19GRCh37
Build 36999,655,358 - 99,658,818 (+)NCBINCBI36hg18NCBI36
Build 34997,695,091 - 97,698,551NCBI
Celera971,129,774 - 71,133,234 (+)NCBI
Cytogenetic Map9q22.33NCBI
HuRef970,216,543 - 70,219,997 (+)NCBIHuRef
CHM1_19100,762,045 - 100,765,505 (+)NCBICHM1_1
JBrowse: View Region in Genome Browser (JBrowse)

Disease Annotations
Gene-Chemical Interaction Annotations
Gene Ontology Annotations
Phenotype Annotations
References - curated
References - uncurated


Comparative Map Data
Position Markers
miRNA Target Status



Nucleotide Sequences
Protein Sequences
Clinical Variants

Additional Information

External Database Links
Nomenclature History
More on FOXE1
Alliance Gene
Ensembl Gene
JBrowse: hg19 hg38
HGNC Report
NCBI Genome Data Viewer

CRRD Object Information
CRRD ID: 735499
Created: 2004-02-06
Species: Homo sapiens
Last Modified: 2019-11-26
Status: ACTIVE


RGD is funded by grant HL64541 from the National Heart, Lung, and Blood Institute on behalf of the NIH.