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Gene: Col5a2 (collagen, type V, alpha 2) Mus musculus
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Symbol: Col5a2
Name: collagen, type V, alpha 2
Description: Exhibits SMAD binding activity. Involved in several processes, including cellular response to amino acid stimulus; collagen fibril organization; and skin development. Localizes to the collagen trimer. Used to study type I Ehlers-Danlos syndrome. Human ortholog(s) of this gene implicated in Ehlers-Danlos syndrome. Is expressed in several structures, including atrioventricular valve; embryo mesenchyme; genitourinary system; intraembryonic coelom; and musculoskeletal system. Orthologous to human COL5A2 (collagen type V alpha 2 chain).
Type: protein-coding
RefSeq Status: REVIEWED
Also known as: 1110014L14Rik; collagen alpha-2(V) chain; D230017N05; procollagen, type V, alpha 2
Orthologs:
Homo sapiens (human) : COL5A2 (collagen type V alpha 2 chain)  HGNC  Alliance
Rattus norvegicus (Norway rat) : Col5a2 (collagen type V alpha 2 chain)  Alliance
Chinchilla lanigera (long-tailed chinchilla) : Col5a2 (collagen type V alpha 2 chain)
Pan paniscus (bonobo/pygmy chimpanzee) : COL5A2 (collagen type V alpha 2 chain)
Canis lupus familiaris (dog) : COL5A2 (collagen type V alpha 2 chain)
Ictidomys tridecemlineatus (thirteen-lined ground squirrel) : Col5a2 (collagen type V alpha 2 chain)
Sus scrofa (pig) : COL5A2 (collagen type V alpha 2 chain)
more info ...
Latest Assembly: GRCm38 - Mouse Genome Assembly GRCm38
Position:
Mouse AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCm38145,374,331 - 45,503,282 (-)NCBIGRCm38GRCm38mm10GRCm38
MGSCv37145,431,176 - 45,560,127 (-)NCBIGRCm37mm9NCBIm37
MGSCv36145,318,877 - 45,447,828 (-)NCBImm8
Celera145,675,438 - 45,811,971 (-)NCBICelera
Cytogenetic Map1 C1.1NCBI
JBrowse: View Region in Genome Browser (JBrowse)
Model


Disease Annotations
Gene-Chemical Interaction Annotations
Gene Ontology Annotations
Molecular Pathway Annotations
Phenotype Annotations
References - curated
References - uncurated

Genomics

Comparative Map Data
Position Markers
QTLs in Region (GRCm38)
miRNA Target Status

Expression


Sequence

Nucleotide Sequences
Protein Sequences
Promoters

Additional Information

External Database Links
 
More on Col5a2
Alliance Gene
NCBI Gene
Ensembl Gene
JBrowse: mm9 mm10
MGI Report
NCBI Genome Data Viewer

CRRD Object Information
CRRD ID: 736789
Created: 2004-02-06
Species: Mus musculus
Last Modified: 2019-10-16
Status: ACTIVE



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RGD is funded by grant HL64541 from the National Heart, Lung, and Blood Institute on behalf of the NIH.