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Gene: SHOX2 (short stature homeobox 2) Homo sapiens
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Symbol: SHOX2
Name: short stature homeobox 2
Description: Predicted to have DNA-binding transcription factor activity, RNA polymerase II-specific. Predicted to be involved in heart development; nervous system development; and skeletal system development. Predicted to localize to nuclear chromatin. Implicated in lung cancer.
Type: protein-coding
RefSeq Status: REVIEWED
Also known as: homeobox protein Og12X; OG12; OG12X; paired-related homeobox protein SHOT; short stature homeobox protein 2; SHOT; SHOX homologous gene on chromosome 3
Orthologs:
Mus musculus (house mouse) : Shox2 (short stature homeobox 2)  MGI  Alliance
Rattus norvegicus (Norway rat) : Shox2 (short stature homeobox 2)  Alliance
Chinchilla lanigera (long-tailed chinchilla) : Shox2 (short stature homeobox 2)
Pan paniscus (bonobo/pygmy chimpanzee) : SHOX2 (short stature homeobox 2)
Canis lupus familiaris (dog) : SHOX2 (short stature homeobox 2)
Ictidomys tridecemlineatus (thirteen-lined ground squirrel) : Shox2 (short stature homeobox 2)
Sus scrofa (pig) : SHOX2 (short stature homeobox 2)
Chlorocebus sabaeus (African green monkey) : SHOX2 (short stature homeobox 2)
Heterocephalus glaber (naked mole-rat) : Shox2 (short stature homeobox 2)
more info ...
Allele / Splice: See ClinVar data
Latest Assembly: GRCh38 - Human Genome Assembly GRCh38
Position:
Human AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCh38 Ensembl3158,095,954 - 158,106,503 (-)EnsemblGRCh38hg38GRCh38
GRCh383158,095,905 - 158,106,420 (-)NCBIGRCh38GRCh38hg38GRCh38
GRCh373157,813,800 - 157,823,952 (-)NCBIGRCh37GRCh37hg19GRCh37
Build 363159,296,494 - 159,306,630 (-)NCBINCBI36hg18NCBI36
Build 343159,297,570 - 159,306,541NCBI
Celera3156,237,551 - 156,247,714 (-)NCBI
Cytogenetic Map3q25.32NCBI
HuRef3155,210,551 - 155,220,711 (-)NCBIHuRef
CHM1_13157,777,104 - 157,787,273 (-)NCBICHM1_1
JBrowse: View Region in Genome Browser (JBrowse)
Model


Disease Annotations
Gene-Chemical Interaction Annotations
Gene Ontology Annotations
References - curated
References - uncurated

Genomics

Comparative Map Data
Position Markers
miRNA Target Status

Expression

RNA-SEQ Expression

Sequence

Nucleotide Sequences
Protein Sequences
Promoters
Clinical Variants

Additional Information

External Database Links
 
More on SHOX2
Alliance Gene
NCBI Gene
Ensembl Gene
JBrowse: hg19 hg38
HGNC Report
NCBI Genome Data Viewer

CRRD Object Information
CRRD ID: 736918
Created: 2004-02-06
Species: Homo sapiens
Last Modified: 2020-03-24
Status: ACTIVE



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RGD is funded by grant HL64541 from the National Heart, Lung, and Blood Institute on behalf of the NIH.