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Gene: Scn9a (sodium channel, voltage-gated, type IX, alpha) Mus musculus
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Symbol: Scn9a
Name: sodium channel, voltage-gated, type IX, alpha
Description: Predicted to have sodium ion binding activity and voltage-gated sodium channel activity. Involved in several processes, including behavioral response to pain; inflammatory response; and response to toxic substance. Predicted to localize to the axon and voltage-gated sodium channel complex. Human ortholog(s) of this gene implicated in Dravet syndrome; erythromelalgia; and generalized epilepsy with febrile seizures plus 7. Is expressed in several structures, including alimentary system; brain; immune system; male reproductive gland or organ; and respiratory system epithelium. Orthologous to human SCN9A (sodium voltage-gated channel alpha subunit 9); INTERACTS WITH ethanol; mono(2-ethylhexyl) phthalate; sodium atom.
Type: protein-coding
RefSeq Status: VALIDATED
Also known as: KIAA4197; mKIAA4197; Nav1.7; peripheral sodium channel 1; PN1; Scn1a; sodium channel 25; sodium channel protein type 9 subunit alpha; sodium channel protein type IX subunit alpha; sodium channel, voltage-gated, type IX, alpha polypeptide; voltage-gated sodium channel alpha subunit Nav1.7; voltage-gated sodium channel Nav1.7 variant a; voltage-gated sodium channel Nav1.7 variant b; voltage-gated sodium channel subunit alpha Nav1.7
Orthologs:
Homo sapiens (human) : SCN9A (sodium voltage-gated channel alpha subunit 9)  HGNC  Alliance
Rattus norvegicus (Norway rat) : Scn9a (sodium voltage-gated channel alpha subunit 9)  Alliance
Chinchilla lanigera (long-tailed chinchilla) : Scn9a (sodium voltage-gated channel alpha subunit 9)
Pan paniscus (bonobo/pygmy chimpanzee) : SCN9A (sodium voltage-gated channel alpha subunit 9)
Canis lupus familiaris (dog) : SCN9A (sodium voltage-gated channel alpha subunit 9)
Ictidomys tridecemlineatus (thirteen-lined ground squirrel) : Scn9a (sodium voltage-gated channel alpha subunit 9)
Sus scrofa (pig) : SCN9A (sodium voltage-gated channel alpha subunit 9)
more info ...
Latest Assembly: GRCm38 - Mouse Genome Assembly GRCm38
Position:
Mouse AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCm38266,480,080 - 66,635,114 (-)NCBIGRCm38GRCm38mm10GRCm38
MGSCv37266,318,137 - 66,473,009 (-)NCBIGRCm37mm9NCBIm37
MGSCv36266,280,919 - 66,435,791 (-)NCBImm8
Celera268,159,792 - 68,315,367 (-)NCBICelera
Cytogenetic Map2 C1.3NCBI
cM Map239.13NCBI
JBrowse: View Region in Genome Browser (JBrowse)
Model


Disease Annotations
Gene-Chemical Interaction Annotations
Gene Ontology Annotations
Phenotype Annotations
References - curated
References - uncurated

Genomics

Comparative Map Data
Position Markers
QTLs in Region (GRCm38)
miRNA Target Status

Expression


Sequence

Nucleotide Sequences
Protein Sequences
Promoters

Additional Information

External Database Links
 
More on Scn9a
Alliance Gene
NCBI Gene
Ensembl Gene
JBrowse: mm9 mm10
MGI Report
NCBI Genome Data Viewer

CRRD Object Information
CRRD ID: 737152
Created: 2004-02-06
Species: Mus musculus
Last Modified: 2019-09-12
Status: ACTIVE



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RGD is funded by grant HL64541 from the National Heart, Lung, and Blood Institute on behalf of the NIH.