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Gene: LOC102547963 (leucine-rich repeat and transmembrane domain-containing protein 1-like) Rattus norvegicus
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Symbol: LOC102547963
Name: leucine-rich repeat and transmembrane domain-containing protein 1-like
Description: Predicted to have Roundabout binding activity and heparin binding activity. Predicted to be involved in axon guidance; negative chemotaxis; and positive regulation of synapse assembly. Predicted to localize to the integral component of membrane. Orthologous to human LRTM1 (leucine rich repeats and transmembrane domains 1); INTERACTS WITH (2,4,5-trichlorophenoxy)acetic acid (ortholog); 17beta-estradiol (ortholog); 2,2',4,4'-Tetrabromodiphenyl ether (ortholog).
Type: protein-coding
RefSeq Status: MODEL
Also known as: leucine-rich repeat and transmembrane domain-containing protein 1
Orthologs:
Latest Assembly: Rnor_6.0 - RGSC Genome Assembly v6.0
Position:
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Rnor_6.0165,078,506 - 5,089,888 (+)NCBIRnor6.0Rnor_6.0rn6Rnor6.0
Rnor_6.0 Ensembl165,082,239 - 5,087,844 (+)EnsemblRnor6.0rn6Rnor6.0
Rnor_5.0165,018,926 - 5,029,990 (+)NCBIRnor5.0Rnor_5.0rn5Rnor5.0
Celera1610,954,321 - 10,965,702 (-)NCBICelera
Cytogenetic Map16p16NCBI
JBrowse: View Region in Genome Browser (JBrowse)
Model


Gene-Chemical Interaction Annotations
Gene Ontology Annotations
References - curated
References - uncurated

Genomics

Comparative Map Data
QTLs in Region (Rnor_6.0)

Expression


Sequence

Nucleotide Sequences
Protein Sequences
Transcriptome

Strain Variation

Strain Sequence Variants (Rnor 6.0)

Additional Information

External Database Links
Nomenclature History
 
More on LOC102547963
Alliance Gene
NCBI Gene
Ensembl Gene
JBrowse: rn5 rn6
NCBI Genome Data Viewer

CRRD Object Information
CRRD ID: 7612006
Created: 2013-12-18
Species: Rattus norvegicus
Last Modified: 2019-11-27
Status: ACTIVE



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RGD is funded by grant HL64541 from the National Heart, Lung, and Blood Institute on behalf of the NIH.