Submit Data |  Help |  Video Tutorials |  News |  Publications |  FTP Download |  REST API |  Citing RGD |  Contact   
Gene: Pcdhga6 (protocadherin gamma subfamily A, 6) Rattus norvegicus
Analyze
Symbol: Pcdhga6
Name: protocadherin gamma subfamily A, 6
Description: Predicted to have calcium ion binding activity. Predicted to be involved in homophilic cell adhesion via plasma membrane adhesion molecules. Predicted to localize to the membrane. Orthologous to human PCDHGA6 (protocadherin gamma subfamily A, 6); INTERACTS WITH aflatoxin B1 (ortholog); bisphenol F (ortholog); doxorubicin (ortholog).
Type: protein-coding
Also known as: LOC102552796; protocadherin gamma-A6; protocadherin gamma-A6-like
Orthologs:
Latest Assembly: Rnor_6.0 - RGSC Genome Assembly v6.0
NCBI Annotation Information: Genome Annotation Status: not in current annotation release
Position:
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Rnor_6.01830,855,236 - 30,863,958 (+)NCBIRnor6.0Rnor_6.0rn6Rnor6.0
Rnor_6.0 Ensembl1830,856,847 - 30,859,261 (+)EnsemblRnor6.0rn6Rnor6.0
Rnor_5.01830,549,451 - 30,553,696 (+)NCBIRnor5.0Rnor_5.0rn5Rnor5.0
Cytogenetic Map18p11NCBI
JBrowse: View Region in Genome Browser (JBrowse)
Model


Disease Annotations
Gene-Chemical Interaction Annotations
Gene Ontology Annotations
References - curated
References - uncurated

Genomics

Comparative Map Data
QTLs in Region (Rnor_6.0)
miRNA Target Status

Expression

RNA-SEQ Expression

Sequence

Nucleotide Sequences
Protein Sequences
Transcriptome
Promoters

Strain Variation

Strain Sequence Variants (Rnor 6.0)
Damaging Variants

Additional Information

External Database Links
Nomenclature History
 
More on Pcdhga6
Alliance Gene
NCBI Gene
Ensembl Gene
JBrowse: rn5 rn6
NCBI Genome Data Viewer

CRRD Object Information
CRRD ID: 7625105
Created: 2013-12-18
Species: Rattus norvegicus
Last Modified: 2019-11-27
Status: ACTIVE



NHLBI Logo

RGD is funded by grant HL64541 from the National Heart, Lung, and Blood Institute on behalf of the NIH.