Submit Data |  Help |  Video Tutorials |  News |  Publications |  FTP Download |  REST API |  Citing RGD |  Contact   
Gene: LOC102549061 (histone H2B type 1-N-like) Rattus norvegicus
Analyze
Symbol: LOC102549061
Name: histone H2B type 1-N-like
Description: Predicted to have protein heterodimerization activity. Predicted to localize to the cytosol and nucleoplasm. Orthologous to human H2BC3 (H2B clustered histone 3); INTERACTS WITH 6-propyl-2-thiouracil; bisphenol A; (+)-catechin (ortholog).
Type: protein-coding
RefSeq Status: MODEL
Also known as: histone H2B type 1-B
Orthologs:
Homo sapiens (human) : H2BC3 (H2B clustered histone 3)  HGNC  Alliance
Mus musculus (house mouse) : H2bc3 (H2B clustered histone 3)  MGI  Alliance
Pan paniscus (bonobo/pygmy chimpanzee) : LOC100992900 (histone H2B type 1-B)
Ictidomys tridecemlineatus (thirteen-lined ground squirrel) : LOC101974236 (histone H2B type 1-B)
Sus scrofa (pig) : LOC110261486 (histone H2B type 1-B)
Chlorocebus sabaeus (African green monkey) : LOC103222019 (histone H2B type 1-B)
more info ...
Latest Assembly: Rnor_6.0 - RGSC Genome Assembly v6.0
Position:
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Rnor_6.01743,627,872 - 43,628,518 (+)NCBIRnor6.0Rnor_6.0rn6Rnor6.0
Rnor_6.0 Ensembl1743,627,930 - 43,628,310 (+)Ensembl
Rnor_5.01745,482,285 - 45,482,903 (+)NCBIRnor5.0Rnor_5.0rn5Rnor5.0
Celera1741,011,236 - 41,011,883 (+)NCBICelera
Cytogenetic Map17p11NCBI
JBrowse: View Region in Genome Browser (JBrowse)
Model


Gene-Chemical Interaction Annotations
Gene Ontology Annotations
References - curated
References - uncurated

Genomics

Comparative Map Data
QTLs in Region (Rnor_6.0)

Expression

RNA-SEQ Expression

Sequence

Nucleotide Sequences
Protein Sequences
Transcriptome
Promoters

Strain Variation

Strain Sequence Variants (Rnor 6.0)
Damaging Variants

Additional Information

External Database Links
Nomenclature History
 
More on LOC102549061
Alliance Gene
NCBI Gene
Ensembl Gene
JBrowse: rn5 rn6
NCBI Genome Data Viewer

CRRD Object Information
CRRD ID: 7729692
Created: 2013-12-18
Species: Rattus norvegicus
Last Modified: 2019-11-27
Status: ACTIVE



NHLBI Logo

RGD is funded by grant HL64541 from the National Heart, Lung, and Blood Institute on behalf of the NIH.