Cers3 (ceramide synthase 3) - Chinchilla Research Resource Database
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Gene: Cers3 (ceramide synthase 3) Chinchilla lanigera
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Symbol: Cers3
Name: ceramide synthase 3
CRRD ID: 8753956
Description: ENCODES a protein that exhibits sphingosine N-acyltransferase activity (ortholog); INVOLVED IN ceramide biosynthetic process (ortholog); cornification (ortholog); epidermis development (ortholog); ASSOCIATED WITH autosomal recessive congenital ichthyosis 9 (ortholog); Neurodevelopmental Disorders (ortholog); prostate cancer (ortholog); FOUND IN endoplasmic reticulum (ortholog)
Type: protein-coding
RefSeq Status: MODEL
Orthologs:
Homo sapiens (human) : CERS3 (ceramide synthase 3)  HGNC  Alliance
Mus musculus (house mouse) : Cers3 (ceramide synthase 3)  MGI  Alliance
Rattus norvegicus (Norway rat) : Cers3 (ceramide synthase 3)  Alliance
Pan paniscus (bonobo/pygmy chimpanzee) : CERS3 (ceramide synthase 3)
Canis lupus familiaris (dog) : CERS3 (ceramide synthase 3)
Ictidomys tridecemlineatus (thirteen-lined ground squirrel) : Cers3 (ceramide synthase 3)
Sus scrofa (pig) : CERS3 (ceramide synthase 3)
Chlorocebus sabaeus (African green monkey) : CERS3 (ceramide synthase 3)
Heterocephalus glaber (naked mole-rat) : Cers3 (ceramide synthase 3)
more info ...
Latest Assembly: ChiLan1.0 - Chinchilla ChiLan1.0 Assembly
Position:
Chinchilla AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChiLan1.0 EnsemblNW_00495541627,461,335 - 27,536,188 (-)EnsemblChiLan1.0
ChiLan1.0NW_00495541627,461,950 - 27,577,145 (-)NCBIChiLan1.0ChiLan1.0
JBrowse: View Region in Genome Browser (JBrowse)
Model


Disease Annotations     Click to see Annotation Detail View

Gene Ontology Annotations     Click to see Annotation Detail View

Biological Process

Cellular Component

Molecular Function

References


Genomics

Comparative Map Data
Cers3
(Chinchilla lanigera - long-tailed chinchilla)
Chinchilla AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChiLan1.0 EnsemblNW_00495541627,461,335 - 27,536,188 (-)EnsemblChiLan1.0
ChiLan1.0NW_00495541627,461,950 - 27,577,145 (-)NCBIChiLan1.0ChiLan1.0
CERS3
(Homo sapiens - human)
Human AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCh38.p13 Ensembl15100,400,395 - 100,544,995 (-)EnsemblGRCh38hg38GRCh38
GRCh3815100,400,395 - 100,544,982 (-)NCBIGRCh38GRCh38hg38GRCh38
GRCh3715100,940,600 - 101,084,925 (-)NCBIGRCh37GRCh37hg19GRCh37
Build 361598,758,123 - 98,902,448 (-)NCBINCBI36hg18NCBI36
Build 341598,758,122 - 98,902,448NCBI
Celera1577,357,728 - 77,501,799 (-)NCBI
Cytogenetic Map15q26.3NCBI
HuRef1577,065,991 - 77,210,030 (-)NCBIHuRef
CHM1_115100,781,510 - 100,925,487 (-)NCBICHM1_1
Cers3
(Mus musculus - house mouse)
Mouse AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCm39766,382,864 - 66,473,440 (+)NCBI
GRCm38766,733,118 - 66,823,692 (+)NCBIGRCm38GRCm38mm10GRCm38
GRCm38.p6 Ensembl766,743,504 - 66,823,691 (+)EnsemblGRCm38mm10GRCm38
MGSCv37773,888,390 - 73,968,578 (+)NCBIGRCm37mm9NCBIm37
MGSCv36766,622,595 - 66,700,792 (+)NCBImm8
Celera764,196,648 - 64,276,685 (+)NCBICelera
Cytogenetic Map7CNCBI
Cers3
(Rattus norvegicus - Norway rat)
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Rnor_6.01127,706,618 - 127,781,041 (+)NCBIRnor6.0Rnor_6.0rn6Rnor6.0
Rnor_6.0 Ensembl1127,648,234 - 127,781,017 (+)EnsemblRnor6.0rn6Rnor6.0
Rnor_5.01128,782,755 - 128,856,462 (+)NCBIRnor5.0Rnor_5.0rn5Rnor5.0
RGSC_v3.41121,213,298 - 121,298,770 (+)NCBIRGSC3.4rn4RGSC3.4
Celera1112,540,288 - 112,624,835 (+)NCBICelera
Cytogenetic Map1q22NCBI
CERS3
(Pan paniscus - bonobo/pygmy chimpanzee)
Bonobo AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
PanPan1.11598,422,256 - 98,521,775 (-)NCBIpanpan1.1PanPan1.1panPan2
PanPan1.1 Ensembl1598,422,256 - 98,521,775 (-)Ensemblpanpan1.1panPan2
Mhudiblu_PPA_v01579,128,338 - 79,272,018 (-)NCBIMhudiblu_PPA_v0panPan3
CERS3
(Canis lupus familiaris - dog)
Dog AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
CanFam3.1 Ensembl340,459,162 - 40,568,272 (+)EnsemblCanFam3.1canFam3CanFam3.1
CanFam3.1340,448,174 - 40,570,736 (+)NCBICanFam3.1CanFam3.1canFam3CanFam3.1
Cers3
(Ictidomys tridecemlineatus - thirteen-lined ground squirrel)
Squirrel AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
SpeTri2.0NW_0049364833,276,519 - 3,365,054 (+)NCBISpeTri2.0SpeTri2.0SpeTri2.0
CERS3
(Sus scrofa - pig)
Pig AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Sscrofa11.1 Ensembl1139,030,642 - 139,136,874 (-)EnsemblSscrofa11.1susScr11Sscrofa11.1
Sscrofa11.11139,027,604 - 139,154,830 (-)NCBISscrofa11.1Sscrofa11.1susScr11Sscrofa11.1
Sscrofa10.21155,237,635 - 155,359,222 (-)NCBISscrofa10.2Sscrofa10.2susScr3
CERS3
(Chlorocebus sabaeus - African green monkey)
Vervet AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChlSab1.1 Ensembl2918,929,866 - 18,974,662 (-)Ensembl
ChlSab1.12918,883,532 - 19,016,790 (-)NCBI
Cers3
(Heterocephalus glaber - naked mole-rat)
Molerat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HetGla 1.0NW_0046247684,150,680 - 4,287,741 (+)NCBI


Expression


Sequence


Reference Sequences
RefSeq Acc Id: ENSCLAT00000015683   ⟹   ENSCLAP00000015521
RefSeq Status:
Type: CODING
Position:
Chinchilla AssemblyChrPosition (strand)Source
ChiLan1.0 EnsemblNW_00495541627,461,335 - 27,536,188 (-)Ensembl
RefSeq Acc Id: XM_005381640   ⟹   XP_005381697
RefSeq Status:
Type: CODING
Position:
Chinchilla AssemblyChrPosition (strand)Source
ChiLan1.0NW_00495541627,461,950 - 27,577,118 (-)NCBI
Sequence:
RefSeq Acc Id: XM_005381641   ⟹   XP_005381698
RefSeq Status:
Type: CODING
Position:
Chinchilla AssemblyChrPosition (strand)Source
ChiLan1.0NW_00495541627,461,950 - 27,566,861 (-)NCBI
Sequence:
RefSeq Acc Id: XM_013512586   ⟹   XP_013368040
RefSeq Status:
Type: CODING
Position:
Chinchilla AssemblyChrPosition (strand)Source
ChiLan1.0NW_00495541627,461,950 - 27,577,124 (-)NCBI
Sequence:
RefSeq Acc Id: XM_013512587   ⟹   XP_013368041
RefSeq Status:
Type: CODING
Position:
Chinchilla AssemblyChrPosition (strand)Source
ChiLan1.0NW_00495541627,461,950 - 27,577,145 (-)NCBI
Sequence:
Protein Sequences
Protein RefSeqs XP_005381697 (Get FASTA)   NCBI Sequence Viewer  
  XP_005381698 (Get FASTA)   NCBI Sequence Viewer  
  XP_013368040 (Get FASTA)   NCBI Sequence Viewer  
  XP_013368041 (Get FASTA)   NCBI Sequence Viewer  
Reference Sequences
RefSeq Acc Id: XP_005381697   ⟸   XM_005381640
- Peptide Label: isoform X1
- Sequence:
RefSeq Acc Id: XP_005381698   ⟸   XM_005381641
- Peptide Label: isoform X1
- Sequence:
RefSeq Acc Id: XP_013368041   ⟸   XM_013512587
- Peptide Label: isoform X1
- Sequence:
RefSeq Acc Id: XP_013368040   ⟸   XM_013512586
- Peptide Label: isoform X2
- Sequence:
RefSeq Acc Id: ENSCLAP00000015521   ⟸   ENSCLAT00000015683


Additional Information

Database Acc Id Source(s)
Ensembl Genes ENSCLAG00000010671 Ensembl, ENTREZGENE
Ensembl Protein ENSCLAP00000015521 ENTREZGENE
Ensembl Transcript ENSCLAT00000015683 ENTREZGENE
NCBI Gene Cers3 ENTREZGENE