Sh3gl2 (SH3 domain containing GRB2 like 2, endophilin A1) - Chinchilla Research Resource Database
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Gene: Sh3gl2 (SH3 domain containing GRB2 like 2, endophilin A1) Chinchilla lanigera
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Symbol: Sh3gl2
Name: SH3 domain containing GRB2 like 2, endophilin A1
CRRD ID: 8856463
Description: ENCODES a protein that exhibits identical protein binding (ortholog); lipid binding (ortholog); protein C-terminus binding (ortholog); INVOLVED IN cellular response to brain-derived neurotrophic factor stimulus (ortholog); dendrite extension (ortholog); lipid tube assembly (ortholog); PARTICIPATES IN clathrin-dependent synaptic vesicle endocytosis; ASSOCIATED WITH visual epilepsy (ortholog); FOUND IN basal dendrite (ortholog); cytosol (ortholog); early endosome (ortholog)
Type: protein-coding
RefSeq Status: MODEL
Also known as: endophilin-A1; SH3-domain GRB2-like 2
Orthologs:
Latest Assembly: ChiLan1.0 - Chinchilla ChiLan1.0 Assembly
Position:
Chinchilla AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChiLan1.0 EnsemblNW_00495543420,331,779 - 20,381,376 (+)EnsemblChiLan1.0
ChiLan1.0NW_00495543420,332,727 - 20,381,320 (+)NCBIChiLan1.0ChiLan1.0
JBrowse: View Region in Genome Browser (JBrowse)
Model


Disease Annotations     Click to see Annotation Detail View

Molecular Pathway Annotations     Click to see Annotation Detail View
References


Genomics

Comparative Map Data
Sh3gl2
(Chinchilla lanigera - long-tailed chinchilla)
Chinchilla AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChiLan1.0 EnsemblNW_00495543420,331,779 - 20,381,376 (+)EnsemblChiLan1.0
ChiLan1.0NW_00495543420,332,727 - 20,381,320 (+)NCBIChiLan1.0ChiLan1.0
SH3GL2
(Homo sapiens - human)
Human AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCh38.p13 Ensembl917,579,066 - 17,797,124 (+)EnsemblGRCh38hg38GRCh38
GRCh38917,579,066 - 17,797,124 (+)NCBIGRCh38GRCh38hg38GRCh38
GRCh37917,578,953 - 17,797,122 (+)NCBIGRCh37GRCh37hg19GRCh37
Build 36917,569,194 - 17,787,122 (+)NCBINCBI36hg18NCBI36
Build 34917,569,193 - 17,787,120NCBI
Celera917,507,463 - 17,725,658 (+)NCBI
Cytogenetic Map9p22.2NCBI
HuRef917,541,205 - 17,759,965 (+)NCBIHuRef
CHM1_1917,579,358 - 17,797,536 (+)NCBICHM1_1
Sh3gl2
(Mus musculus - house mouse)
Mouse AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCm39485,123,340 - 85,307,617 (+)NCBI
GRCm38485,205,456 - 85,389,380 (+)NCBIGRCm38GRCm38mm10GRCm38
GRCm38.p6 Ensembl485,205,126 - 85,639,195 (+)EnsemblGRCm38mm10GRCm38
MGSCv37484,851,360 - 85,035,284 (+)NCBIGRCm37mm9NCBIm37
MGSCv36484,676,687 - 84,860,611 (+)NCBImm8
Celera483,721,182 - 83,903,108 (+)NCBICelera
Cytogenetic Map4C4NCBI
cM Map440.23NCBI
Sh3gl2
(Rattus norvegicus - Norway rat)
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Rnor_6.05103,479,767 - 103,654,507 (+)NCBIRnor6.0Rnor_6.0rn6Rnor6.0
Rnor_6.0 Ensembl5103,479,767 - 103,654,247 (+)EnsemblRnor6.0rn6Rnor6.0
Rnor_5.05107,479,270 - 107,653,523 (+)NCBIRnor5.0Rnor_5.0rn5Rnor5.0
RGSC_v3.45104,129,280 - 104,308,317 (+)NCBIRGSC3.4rn4RGSC3.4
RGSC_v3.15104,300,491 - 104,313,320 (+)NCBI
Celera598,159,729 - 98,334,521 (+)NCBICelera
Cytogenetic Map5q31NCBI
SH3GL2
(Pan paniscus - bonobo/pygmy chimpanzee)
Bonobo AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
PanPan1.1917,878,860 - 18,097,579 (+)NCBIpanpan1.1PanPan1.1panPan2
PanPan1.1 Ensembl918,045,198 - 18,097,579 (+)Ensemblpanpan1.1panPan2
Mhudiblu_PPA_v0917,386,298 - 17,605,722 (+)NCBIMhudiblu_PPA_v0panPan3
SH3GL2
(Canis lupus familiaris - dog)
Dog AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
CanFam3.1 Ensembl1137,577,053 - 37,767,572 (+)EnsemblCanFam3.1canFam3CanFam3.1
CanFam3.11137,720,793 - 37,769,027 (+)NCBICanFam3.1CanFam3.1canFam3CanFam3.1
SH3GL2
(Sus scrofa - pig)
Pig AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Sscrofa11.1 Ensembl1205,081,227 - 205,285,343 (-)EnsemblSscrofa11.1susScr11Sscrofa11.1
Sscrofa11.11205,081,227 - 205,285,359 (-)NCBISscrofa11.1Sscrofa11.1susScr11Sscrofa11.1
Sscrofa10.21228,802,236 - 229,005,151 (-)NCBISscrofa10.2Sscrofa10.2susScr3
SH3GL2
(Chlorocebus sabaeus - African green monkey)
Vervet AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChlSab1.1 Ensembl1261,862,943 - 61,917,315 (-)Ensembl
ChlSab1.11261,862,997 - 62,085,254 (-)NCBI
Sh3gl2
(Heterocephalus glaber - naked mole-rat)
Molerat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HetGla 1.0NW_00462473621,554,950 - 21,715,522 (+)NCBI


Expression


Sequence


Reference Sequences
RefSeq Acc Id: ENSCLAT00000018213   ⟹   ENSCLAP00000018035
RefSeq Status:
Type: CODING
Position:
Chinchilla AssemblyChrPosition (strand)Source
ChiLan1.0 EnsemblNW_00495543420,331,779 - 20,379,979 (+)Ensembl
RefSeq Acc Id: ENSCLAT00000018214   ⟹   ENSCLAP00000018036
RefSeq Status:
Type: CODING
Position:
Chinchilla AssemblyChrPosition (strand)Source
ChiLan1.0 EnsemblNW_00495543420,332,488 - 20,381,376 (+)Ensembl
RefSeq Acc Id: ENSCLAT00000018215   ⟹   ENSCLAP00000018037
RefSeq Status:
Type: CODING
Position:
Chinchilla AssemblyChrPosition (strand)Source
ChiLan1.0 EnsemblNW_00495543420,332,727 - 20,370,286 (+)Ensembl
RefSeq Acc Id: XM_013516394   ⟹   XP_013371848
RefSeq Status:
Type: CODING
Position:
Chinchilla AssemblyChrPosition (strand)Source
ChiLan1.0NW_00495543420,332,727 - 20,381,320 (+)NCBI
Sequence:
Protein Sequences
Protein RefSeqs XP_013371848 (Get FASTA)   NCBI Sequence Viewer  
Reference Sequences
RefSeq Acc Id: XP_013371848   ⟸   XM_013516394
- Sequence:
RefSeq Acc Id: ENSCLAP00000018035   ⟸   ENSCLAT00000018213
RefSeq Acc Id: ENSCLAP00000018036   ⟸   ENSCLAT00000018214
RefSeq Acc Id: ENSCLAP00000018037   ⟸   ENSCLAT00000018215


Additional Information

Database Acc Id Source(s)
Ensembl Genes ENSCLAG00000012375 Ensembl, ENTREZGENE
Ensembl Protein ENSCLAP00000018036 ENTREZGENE
Ensembl Transcript ENSCLAT00000018214 ENTREZGENE
NCBI Gene Sh3gl2 ENTREZGENE


Nomenclature History
Date Current Symbol Current Name Previous Symbol Previous Name Description Reference Status
2016-08-03 Sh3gl2  SH3 domain containing GRB2 like 2, endophilin A1    SH3-domain GRB2-like 2  Symbol and/or name change 5135510 APPROVED