Gale (UDP-galactose-4-epimerase) - Chinchilla Research Resource Database
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Gene: Gale (UDP-galactose-4-epimerase) Chinchilla lanigera
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Symbol: Gale
Name: UDP-galactose-4-epimerase
CRRD ID: 8893222
Description: ENCODES a protein that exhibits identical protein binding (ortholog); protein homodimerization activity (ortholog); UDP-glucose 4-epimerase activity (ortholog); INVOLVED IN galactose catabolic process (ortholog); galactose metabolic process (ortholog); PARTICIPATES IN galactokinase deficiency pathway; galactose metabolic pathway; galactosemia pathway; ASSOCIATED WITH 3-Hydroxy-3-Methylglutaryl-CoA Lyase Deficiency (ortholog); Developmental Disabilities (ortholog); galactose epimerase deficiency (ortholog)
Type: protein-coding
RefSeq Status: MODEL
Also known as: UDP-glucose 4-epimerase
Orthologs:
Homo sapiens (human) : GALE (UDP-galactose-4-epimerase)  HGNC  Alliance
Mus musculus (house mouse) : Gale (galactose-4-epimerase, UDP)  MGI  Alliance
Rattus norvegicus (Norway rat) : Gale (UDP-galactose-4-epimerase)  Alliance
Pan paniscus (bonobo/pygmy chimpanzee) : GALE (UDP-galactose-4-epimerase)
Canis lupus familiaris (dog) : GALE (UDP-galactose-4-epimerase)
Ictidomys tridecemlineatus (thirteen-lined ground squirrel) : Gale (UDP-galactose-4-epimerase)
Sus scrofa (pig) : GALE (UDP-galactose-4-epimerase)
Chlorocebus sabaeus (African green monkey) : GALE (UDP-galactose-4-epimerase)
Heterocephalus glaber (naked mole-rat) : Gale (UDP-galactose-4-epimerase)
more info ...
Latest Assembly: ChiLan1.0 - Chinchilla ChiLan1.0 Assembly
Position:
Chinchilla AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChiLan1.0 EnsemblNW_0049554523,713,080 - 3,718,425 (-)EnsemblChiLan1.0
ChiLan1.0NW_0049554523,715,107 - 3,719,288 (-)NCBIChiLan1.0ChiLan1.0
JBrowse: View Region in Genome Browser (JBrowse)
Model


Disease Annotations     Click to see Annotation Detail View

Gene Ontology Annotations     Click to see Annotation Detail View

Biological Process

Molecular Function

Molecular Pathway Annotations     Click to see Annotation Detail View
References


Genomics

Comparative Map Data
Gale
(Chinchilla lanigera - long-tailed chinchilla)
Chinchilla AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChiLan1.0 EnsemblNW_0049554523,713,080 - 3,718,425 (-)EnsemblChiLan1.0
ChiLan1.0NW_0049554523,715,107 - 3,719,288 (-)NCBIChiLan1.0ChiLan1.0
GALE
(Homo sapiens - human)
Human AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCh38.p13 Ensembl123,795,599 - 23,800,781 (-)EnsemblGRCh38hg38GRCh38
GRCh38123,795,599 - 23,800,754 (-)NCBIGRCh38GRCh38hg38GRCh38
GRCh37124,122,089 - 24,127,294 (-)NCBIGRCh37GRCh37hg19GRCh37
Build 36123,994,676 - 23,999,881 (-)NCBINCBI36hg18NCBI36
Build 34123,867,394 - 23,872,600NCBI
Celera122,451,653 - 22,456,862 (-)NCBI
Cytogenetic Map1p36.11NCBI
HuRef122,373,666 - 22,378,871 (-)NCBIHuRef
CHM1_1124,234,878 - 24,240,083 (-)NCBICHM1_1
Gale
(Mus musculus - house mouse)
Mouse AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCm394135,690,550 - 135,695,489 (+)NCBI
GRCm384135,963,681 - 135,968,178 (+)NCBIGRCm38GRCm38mm10GRCm38
GRCm38.p6 Ensembl4135,963,727 - 135,968,178 (+)EnsemblGRCm38mm10GRCm38
MGSCv374135,521,080 - 135,524,093 (+)NCBIGRCm37mm9NCBIm37
MGSCv364135,237,241 - 135,240,254 (+)NCBImm8
Celera4134,166,296 - 134,169,303 (+)NCBICelera
Cytogenetic Map4D3NCBI
Gale
(Rattus norvegicus - Norway rat)
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Rnor_6.05154,310,453 - 154,314,959 (+)NCBIRnor6.0Rnor_6.0rn6Rnor6.0
Rnor_6.0 Ensembl5154,310,453 - 154,314,955 (+)EnsemblRnor6.0rn6Rnor6.0
Rnor_5.05158,075,304 - 158,079,822 (+)NCBIRnor5.0Rnor_5.0rn5Rnor5.0
RGSC_v3.45154,745,853 - 154,750,357 (+)NCBIRGSC3.4rn4RGSC3.4
RGSC_v3.15154,757,427 - 154,760,391 (+)NCBI
Celera5146,600,743 - 146,605,247 (+)NCBICelera
Cytogenetic Map5q36NCBI
GALE
(Pan paniscus - bonobo/pygmy chimpanzee)
Bonobo AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
PanPan1.1123,971,454 - 23,976,648 (-)NCBIpanpan1.1PanPan1.1panPan2
PanPan1.1 Ensembl123,971,454 - 23,976,500 (-)Ensemblpanpan1.1panPan2
Mhudiblu_PPA_v0122,987,218 - 22,992,416 (-)NCBIMhudiblu_PPA_v0panPan3
GALE
(Canis lupus familiaris - dog)
Dog AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
CanFam3.1 Ensembl275,704,558 - 75,708,169 (+)EnsemblCanFam3.1canFam3CanFam3.1
CanFam3.1275,704,012 - 75,708,206 (+)NCBICanFam3.1CanFam3.1canFam3CanFam3.1
Gale
(Ictidomys tridecemlineatus - thirteen-lined ground squirrel)
Squirrel AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
SpeTri2.0NW_0049364748,949,814 - 8,954,269 (-)NCBISpeTri2.0SpeTri2.0SpeTri2.0
GALE
(Sus scrofa - pig)
Pig AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Sscrofa11.1 Ensembl681,605,965 - 81,630,421 (-)EnsemblSscrofa11.1susScr11Sscrofa11.1
Sscrofa11.1681,605,968 - 81,610,535 (-)NCBISscrofa11.1Sscrofa11.1susScr11Sscrofa11.1
Sscrofa10.2675,416,319 - 75,420,891 (+)NCBISscrofa10.2Sscrofa10.2susScr3
GALE
(Chlorocebus sabaeus - African green monkey)
Vervet AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChlSab1.1 Ensembl20108,886,161 - 108,892,562 (+)Ensembl
ChlSab1.120108,883,796 - 108,889,917 (+)NCBI
Gale
(Heterocephalus glaber - naked mole-rat)
Molerat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HetGla 1.0NW_0046247648,344,180 - 8,348,549 (-)NCBI


Expression


Sequence


Reference Sequences
RefSeq Acc Id: ENSCLAT00000017082   ⟹   ENSCLAP00000016916
RefSeq Status:
Type: CODING
Position:
Chinchilla AssemblyChrPosition (strand)Source
ChiLan1.0 EnsemblNW_0049554523,713,080 - 3,718,425 (-)Ensembl
RefSeq Acc Id: XM_005394776   ⟹   XP_005394833
RefSeq Status:
Type: CODING
Position:
Chinchilla AssemblyChrPosition (strand)Source
ChiLan1.0NW_0049554523,715,107 - 3,719,284 (-)NCBI
Sequence:
RefSeq Acc Id: XM_005394777   ⟹   XP_005394834
RefSeq Status:
Type: CODING
Position:
Chinchilla AssemblyChrPosition (strand)Source
ChiLan1.0NW_0049554523,715,107 - 3,719,288 (-)NCBI
Sequence:
RefSeq Acc Id: XM_005394778   ⟹   XP_005394835
RefSeq Status:
Type: CODING
Position:
Chinchilla AssemblyChrPosition (strand)Source
ChiLan1.0NW_0049554523,715,107 - 3,719,284 (-)NCBI
Sequence:
RefSeq Acc Id: XM_005394780   ⟹   XP_005394837
RefSeq Status:
Type: CODING
Position:
Chinchilla AssemblyChrPosition (strand)Source
ChiLan1.0NW_0049554523,715,678 - 3,719,285 (-)NCBI
Sequence:
RefSeq Acc Id: XM_013519497   ⟹   XP_013374951
RefSeq Status:
Type: CODING
Position:
Chinchilla AssemblyChrPosition (strand)Source
ChiLan1.0NW_0049554523,715,107 - 3,718,425 (-)NCBI
Sequence:
RefSeq Acc Id: XM_013519498   ⟹   XP_013374952
RefSeq Status:
Type: CODING
Position:
Chinchilla AssemblyChrPosition (strand)Source
ChiLan1.0NW_0049554523,715,107 - 3,719,284 (-)NCBI
Sequence:
Reference Sequences
RefSeq Acc Id: XP_005394835   ⟸   XM_005394778
- Peptide Label: isoform X2
- Sequence:
RefSeq Acc Id: XP_005394833   ⟸   XM_005394776
- Peptide Label: isoform X1
- Sequence:
RefSeq Acc Id: XP_005394834   ⟸   XM_005394777
- Peptide Label: isoform X1
- Sequence:
RefSeq Acc Id: XP_005394837   ⟸   XM_005394780
- Peptide Label: isoform X3
- Sequence:
RefSeq Acc Id: XP_013374952   ⟸   XM_013519498
- Peptide Label: isoform X2
- Sequence:
RefSeq Acc Id: XP_013374951   ⟸   XM_013519497
- Peptide Label: isoform X1
- Sequence:
RefSeq Acc Id: ENSCLAP00000016916   ⟸   ENSCLAT00000017082


Additional Information

Database Acc Id Source(s)
Ensembl Genes ENSCLAG00000011611 Ensembl, ENTREZGENE
Ensembl Protein ENSCLAP00000016916 ENTREZGENE
Ensembl Transcript ENSCLAT00000017082 ENTREZGENE
NCBI Gene Gale ENTREZGENE