Submit Data |  Help |  Video Tutorials |  News |  Publications |  FTP Download |  REST API |  Citing RGD |  Contact   
Gene: Col5a1 (collagen type V alpha 1 chain) Chinchilla lanigera
Symbol: Col5a1
Name: collagen type V alpha 1 chain
CRRD ID: 9014928
Description: ENCODES a protein that exhibits extracellular matrix structural constituent (ortholog); heparin binding (ortholog); platelet-derived growth factor binding (ortholog); INVOLVED IN blood vessel development (ortholog); cell adhesion (ortholog); cell migration (ortholog); PARTICIPATES IN syndecan signaling pathway; ASSOCIATED WITH alopecia (ortholog); Animal Mammary Neoplasms (ortholog); Ankyloblepharon Filiforme Adnatum (ortholog); FOUND IN basement membrane (ortholog); collagen trimer (ortholog); collagen type V trimer (ortholog)
Type: protein-coding
RefSeq Status: MODEL
Also known as: collagen alpha-1(V) chain; collagen, type V, alpha 1
Homo sapiens (human) : COL5A1 (collagen type V alpha 1 chain)  HGNC  Alliance
Mus musculus (house mouse) : Col5a1 (collagen, type V, alpha 1)  MGI  Alliance
Rattus norvegicus (Norway rat) : Col5a1 (collagen type V alpha 1 chain)  Alliance
Pan paniscus (bonobo/pygmy chimpanzee) : COL5A1 (collagen type V alpha 1 chain)
Canis lupus familiaris (dog) : COL5A1 (collagen type V alpha 1 chain)
Ictidomys tridecemlineatus (thirteen-lined ground squirrel) : Col5a1 (collagen type V alpha 1 chain)
Sus scrofa (pig) : COL5A1 (collagen type V alpha 1 chain)
Chlorocebus sabaeus (African green monkey) : COL5A1 (collagen type V alpha 1 chain)
Heterocephalus glaber (naked mole-rat) : Col5a1 (collagen type V alpha 1 chain)
more info ...
Latest Assembly: ChiLan1.0 - Chinchilla ChiLan1.0 Assembly
NCBI Annotation Information: Annotation category: partial on reference assembly
Chinchilla AssemblyChrPosition (strand)SourceGenome Browsers
ChiLan1.0 EnsemblNW_0049555133,533,614 - 3,658,161 (+)EnsemblChiLan1.0
ChiLan1.0NW_0049555133,533,612 - 3,660,605 (+)NCBIChiLan1.0ChiLan1.0
JBrowse: View Region in Genome Browser (JBrowse)

Disease Annotations
Gene Ontology Annotations
Molecular Pathway Annotations
References - curated


Comparative Map Data



Nucleotide Sequences
Protein Sequences

Additional Information

External Database Links
Nomenclature History
More on Col5a1
Ensembl Gene
NCBI Genome Data Viewer

CRRD Object Information
CRRD ID: 9014928
Created: 2014-08-14
Species: Chinchilla lanigera
Last Modified: 2019-11-26
Status: ACTIVE


RGD is funded by grant HL64541 from the National Heart, Lung, and Blood Institute on behalf of the NIH.