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Gene: Zbed6 (zinc finger, BED-type containing 6) Rattus norvegicus
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Symbol: Zbed6
Name: zinc finger, BED-type containing 6
CRRD ID: 9238526
Description: Predicted to be involved in blastocyst hatching and negative regulation of transcription by RNA polymerase II. Predicted to localize to nucleolus. Orthologous to human ZBED6 (zinc finger BED-type containing 6); INTERACTS WITH bisphenol A (ortholog); clobetasol (ortholog); cyclosporin A (ortholog).
Type: protein-coding
RefSeq Status: MODEL
Also known as: LOC100909876; LOC685209; similar to Zinc finger BED domain containing protein 4; zinc finger BED domain-containing protein 6; zinc finger BED domain-containing protein 6-like
Orthologs:
Homo sapiens (human) : ZBED6 (zinc finger BED-type containing 6)  HGNC  Alliance
Mus musculus (house mouse) : Zbed6 (zinc finger, BED type containing 6)  MGI  Alliance
Chinchilla lanigera (long-tailed chinchilla) : Zbed6 (zinc finger BED-type containing 6)
Pan paniscus (bonobo/pygmy chimpanzee) : ZBED6 (zinc finger BED-type containing 6)
Canis lupus familiaris (dog) : ZBED6 (zinc finger BED-type containing 6)
Ictidomys tridecemlineatus (thirteen-lined ground squirrel) : Zbed6 (zinc finger BED-type containing 6)
Chlorocebus sabaeus (African green monkey) : ZBED6 (zinc finger BED-type containing 6)
Heterocephalus glaber (naked mole-rat) : Zbed6 (zinc finger BED-type containing 6)
more info ...
Latest Assembly: Rnor_6.0 - RGSC Genome Assembly v6.0
Position:
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Rnor_6.01350,196,143 - 50,211,670 (+)NCBIRnor6.0Rnor_6.0rn6Rnor6.0
Rnor_5.01355,251,587 - 55,254,843 (+)NCBIRnor5.0Rnor_5.0rn5Rnor5.0
RGSC_v3.41346,579,830 - 46,584,923 (-)NCBIRGSC3.4rn4RGSC3.4
Celera1345,441,385 - 45,444,641 (-)NCBICelera
Cytogenetic Map13q13NCBI
JBrowse: View Region in Genome Browser (JBrowse)
Model


References - curated
References - uncurated

Genomics

Comparative Map Data
QTLs in Region (Rnor_6.0)

Expression


Sequence

Nucleotide Sequences
Protein Sequences

Strain Variation

Strain Sequence Variants (Rnor 6.0)
Damaging Variants

Additional Information

External Database Links
Nomenclature History
 
More on Zbed6
Alliance Gene
NCBI Gene
Ensembl Gene
JBrowse: rn5 rn6
NCBI Genome Data Viewer

CRRD Object Information
CRRD ID: 9238526
Created: 2014-08-25
Species: Rattus norvegicus
Last Modified: 2020-08-20
Status: ACTIVE



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RGD is funded by grant HL64541 from the National Heart, Lung, and Blood Institute on behalf of the NIH.