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Gene: Kdm6a (lysine demethylase 6A) Rattus norvegicus
Symbol: Kdm6a
Name: lysine demethylase 6A
Description: Predicted to have DNA binding activity; histone demethylase activity (H3-K27 specific); and identical protein binding activity. Predicted to be involved in several processes, including chordate embryonic development; chromatin organization; and embryonic morphogenesis. Predicted to localize to MLL3/4 complex. Human ortholog(s) of this gene implicated in Kabuki syndrome; acute lymphoblastic leukemia; and esophagus squamous cell carcinoma. Orthologous to human KDM6A (lysine demethylase 6A); INTERACTS WITH 2,3,7,8-tetrachlorodibenzodioxine; 2-acetamidofluorene; bisphenol A.
Type: protein-coding
RefSeq Status: MODEL
Also known as: LOW QUALITY PROTEIN: lysine-specific demethylase 6A; lysine (K)-specific demethylase 6A; lysine-specific demethylase 6A; NEWGENE_1565481
Homo sapiens (human) : KDM6A (lysine demethylase 6A)  HGNC  Alliance
Mus musculus (house mouse) : Kdm6a (lysine (K)-specific demethylase 6A)  MGI  Alliance
Chinchilla lanigera (long-tailed chinchilla) : Kdm6a (lysine demethylase 6A)
Pan paniscus (bonobo/pygmy chimpanzee) : KDM6A (lysine demethylase 6A)
Canis lupus familiaris (dog) : KDM6A (lysine demethylase 6A)
Ictidomys tridecemlineatus (thirteen-lined ground squirrel) : Kdm6a (lysine demethylase 6A)
Sus scrofa (pig) : KDM6A (lysine demethylase 6A)
Chlorocebus sabaeus (African green monkey) : KDM6A (lysine demethylase 6A)
Heterocephalus glaber (naked mole-rat) : Kdm6a (lysine demethylase 6A)
more info ...
Latest Assembly: Rnor_6.0 - RGSC Genome Assembly v6.0
Rat AssemblyChrPosition (strand)SourceGenome Browsers
Rnor_6.0X4,805,493 - 4,945,788 (-)NCBIRnor6.0Rnor_6.0rn6Rnor6.0
Rnor_6.0 EnsemblX4,806,277 - 4,945,944 (-)EnsemblRnor6.0rn6Rnor6.0
CeleraX4,851,606 - 4,991,275 (-)NCBICelera
Cytogenetic MapXq11NCBI
JBrowse: View Region in Genome Browser (JBrowse)

Disease Annotations
Gene-Chemical Interaction Annotations
Gene Ontology Annotations
References - curated
References - uncurated


Comparative Map Data
QTLs in Region (Rnor_6.0)


RNA-SEQ Expression


Nucleotide Sequences
Protein Sequences

Strain Variation

Strain Sequence Variants (Rnor 6.0)

Additional Information

External Database Links
Nomenclature History
More on Kdm6a
Alliance Gene
Ensembl Gene
JBrowse: rn6
NCBI Genome Data Viewer

CRRD Object Information
CRRD ID: 9275041
Created: 2014-08-25
Species: Rattus norvegicus
Last Modified: 2020-06-09
Status: ACTIVE


RGD is funded by grant HL64541 from the National Heart, Lung, and Blood Institute on behalf of the NIH.