AI462493 Marker Search Result - Rat Genome Database

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General

Marker: AI462493

Symbol:

AI462493

Also known as:

436287;

Expected Size:

117 (bp)

Position

Mouse Assembly	Chr	Position (strand)	Source	JBrowse
GRCm38	19	8,880,291 - 8,880,407	UniSTS	GRCm38
MGSCv37	19	8,954,781 - 8,954,897	UniSTS	GRCm37
Celera	19	8,640,893 - 8,641,009	UniSTS
Cytogenetic Map	19	A	UniSTS
Whitehead/MRC_RH	19	80.59	UniSTS

Is Marker For:

Genes: Uqcc3

Annotation

References - curated

1.	RGD automated pipelines

Strains and Sequence

Sequence


Forward Primer	TTAGTTCCGTTGGTTCCACA
Reverse Primer	ATGGAGTCGGGAGATACACC

Region

Genes in Region (GRCm38)

The following Genes overlap with this region.

RGD ID	Symbol	Name	Chr	Start	Stop	Species
1619903	Uqcc3	ubiquinol-cytochrome c reductase complex assembly factor 3	19	8880014	8880933	Mouse

Nucleotide Sequences

RefSeq Transcripts	NM_001160356	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
GenBank Nucleotide	AC073153	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	AC129217	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	AI462493	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	AY941793	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	BC029863	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	CL631768	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	CW542117	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	EI191161	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	EI392165	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	ER894217	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	ER895270	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	ER986731	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	ET023335	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	ET052666	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	ET200822	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	ET200903	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	ET201314	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	FI111435	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	FI112218	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	FI113166	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	GL590208	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	KB727500	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles

QTLs in Region (GRCm38)

The following QTLs overlap with this region.

CRRD ID	Symbol	Name	LOD	P Value	Trait	Sub Trait	Chr	Start	Stop	Species
1300776	Lfp3_m	long free running period 3 (mouse)			Not determined		19	1	20278703	Mouse
4142161	Drinksac2_m	drink saccharin 2 (mouse)			Not determined			1	20645286	Mouse
4142302	Nstr1_m	nerve sheath tumor resistance QTL 1 (mouse)			Not determined		19	1	22321310	Mouse
1301271	Datd_m	dopamine transporter density (mouse)			Not determined		19	1	32362870	Mouse
4142406	Pbctlp1_m	peripheral blood cytotoxic T lymphocyte percentage 1 (mouse)			Not determined			1	32897810	Mouse
1300904	Chab5_m	cholesterol absorption 5 (mouse)			Not determined		19	1676400	35676563	Mouse
1357819	Tgct2_m	testicular germ cell tumor 2 (mouse)			Not determined		19	3278551	20562299	Mouse
1300923	Bits4_m	bitterness sensitivity 4 (mouse)			Not determined		19	3345852	37345984	Mouse
1301800	Faq10_m	fluctuating asymmetry QTL 10 (mouse)			Not determined		19	3345852	37345984	Mouse
1300591	Pas3_m	pulmonary adenoma susceptibility 3 (mouse)			Not determined		19	3345852	37345984	Mouse
1302126	Skull26_m	skull morphology 26 (mouse)			Not determined		19	3345852	37345984	Mouse
11039522	Tbbr4_m	Trypanosoma brucei brucei response 4 (mouse)					19	5335962	39336106	Mouse

Additional Information

External Database Links

Database	Acc Id	Source(s)
NCBI Gene	107197	UniSTS
UniGene	Mm.490289	UniSTS
UniSTS	181194	UniSTS

More on AI462493
	JBrowse: mm9 mm10
	Ensembl
	NCBI

CRRD Object Information
CRRD ID:	4907427
Created:	2011-03-01
Species:	Mus musculus
Last Modified:	2014-08-05
Status:	ACTIVE

RGD is funded by grant HL64541 from the National Heart, Lung, and Blood Institute on behalf of the NIH.