Eae18b QTL Report (Rattus norvegicus) - Rat Genome Database
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QTL: Eae18b (Experimental allergic encephalomyelitis QTL 18b) Rattus norvegicus

Symbol: Eae18b
Name: Experimental allergic encephalomyelitis QTL 18b
CRRD ID: 1331839
Also known as: Experimental autoimmune encephalomyelitis QTL 18b; Eae20; Experimental allergic encephalomyelitis QTL 20
Trait: nervous system integrity trait   (VT:0010566)    
Measurement Type: experimental autoimmune encephalomyelitis severity score   (CMO:0001419)    
LOD Score: 5.8
P Value: 0.03
Variance: Not Available
Inheritance Type: recessive
Position
Rat AssemblyChrPosition (strand)SourceJBrowse
Rnor_6.01064,550,912 - 70,202,084RGD_MAPPER_PIPELINERnor6.0
Rnor_5.01063,463,237 - 70,966,782RGDRnor5.0
RGSC_v3.41067,774,947 - 71,067,824RGDRGSC3.4
RGSC_v3.11067,788,570 - 71,081,447RGD
Cross Type: Intercross
Strains Crossed: DA.ACI-(D10Rat15-D10Rat29) 
JBrowse: View Region in Genome Browser (JBrowse)
Model



Candidate Gene Status
Ccl11 is a candidate Gene for Eae18b
Ccl2 is a candidate Gene for Eae18b
Ccl1 is a candidate Gene for Eae18b

Disease Annotations     Click to see Annotation Detail View

Phenotype Annotations     Click to see Annotation Detail View

Mammalian Phenotype
paralysis  (QTM)
Experimental Data Annotations     Click to see Annotation Detail View

Experimental Condition

Measurement Method

Vertebrate Trait

Rat Strain

References


Region

Genes in Region
The following Genes overlap with this region.    Full Report CSV TAB Printer Analysis Tools
RGD IDSymbolNameChrStartStopSpecies
3877Tnfaip1TNF alpha induced protein 1106579100265805693Rat
68406Timm22translocase of inner mitochondrial membrane 22106455606464563822Rat
3644Ccl11C-C motif chemokine ligand 11106943496569439566Rat
3645Ccl2C-C motif chemokine ligand 2106941206569413863Rat
3942Unc119unc-119 lipid binding chaperone106560691965612324Rat
3967Vtnvitronectin106576796065771040Rat
619780Sez6seizure related 6 homolog106486580264915461Rat
2415Cryba1crystallin, beta A1106516077765167504Rat
70993Flot2flotillin 2106530490165329332Rat
3185Nos2nitric oxide synthase 2106618829066221621Rat
621321Myo1dmyosin ID106786693968142864Rat
620152Spag5sperm associated antigen 5106555278065585773Rat
3004Lgals5galectin 5106622601566229293Rat
3005Lgals9galectin 9106473702264760195Rat
708487Adap2ArfGAP with dual PH domains 2106749485167527582Rat
62077SeboxSEBOX homeobox106577137065774748Rat
3168Nf1neurofibromin 1106673246066928706Rat
2017Asic2acid sensing ion channel subunit 2106824780069347223Rat
621517Crlf3cytokine receptor-like factor 3106738366467401836Rat
3970Foxn1forkhead box N1106562114265634666Rat
629472Cdk5r1cyclin-dependent kinase 5 regulatory subunit 1106786205467863255Rat
2091Aldocaldolase, fructose-bisphosphate C106558650465590093Rat
1304897Rpl23aribosomal protein L23a106544129565443981Rat
1306708Traf4Tnf receptor associated factor 4106541868865424802Rat
1304714Eral1Era-like 12S mitochondrial rRNA chaperone 1106527284965291070Rat
1305651Ccnqcyclin Q106601951966020682Rat
1306279AbrABR activator of RhoGEF and GTPase106456512164657079Rat
1306897Nek8NIMA-related kinase 8106540448965439059Rat
1305058Rab34RAB34, member RAS oncogene family106544811165452178Rat
1305063Rab11fip4RAB11 family interacting protein 4106694236367051672Rat
1306450Psmd11proteasome 26S subunit, non-ATPase 11106781065567857562Rat
1307022Poldip2DNA polymerase delta interacting protein 2106578199465790833Rat
1307023Rhot1ras homolog family member T1106755927767640622Rat
1307423Tmem97transmembrane protein 97106581145565820538Rat
1306595Tefmtranscription elongation factor, mitochondrial106747600667478830Rat
1305252Rnf135ring finger protein 135106753198967551237Rat
61920Slc13a2solute carrier family 13 member 2106566466565692046Rat
1305731Phf12PHD finger protein 12106481546264863514Rat
1307274Sdf2stromal cell derived factor 2106550736465517839Rat
1308105Ksr1kinase suppressor of ras 1106634610066482396Rat
1308105Ksr1kinase suppressor of ras 1106632370466342469Rat
1359195Tlcd1TLC domain containing 1106543910465441140Rat
1309875Lig3DNA ligase 3107013473470158051Rat
1310429RGD1310429similar to Protein Njmu-R1106773813167751049Rat
1359152Ccl7C-C motif chemokine ligand 7106942308369424933Rat
1311347Pipoxpipecolic acid and sarcosine oxidase106495198664964865Rat
1309472Slc46a1solute carrier family 46 member 1106572850865741708Rat
1309255Ccl12chemokine (C-C motif) ligand 12106947686669478416Rat
1309290Supt6hSPT6 homolog, histone chaperone and transcription elongation factor106547047065507581Rat
1309400Ift20intraflagellar transport 20106580580865811353Rat
1307835Wsb1WD repeat and SOCS box-containing 1106658690566602984Rat
1306684Spaca3sperm acrosome associated 3106822773668235295Rat
1310078Sarm1sterile alpha and TIR motif containing 1106574234365766050Rat
1307929RGD1307929similar to CG14967-PA106552314365552629Rat
1305508Dhrs13dehydrogenase/reductase 13106532940765334533Rat
1562012Lyrm9LYR motif containing 9106609947866113559Rat
1566425Tmem199transmembrane protein 199106577572165780293Rat
1311017Utp6UTP6 small subunit processome component106725517767285754Rat
1562698Myo18amyosin XVIIIa106497977065080535Rat
1308121Zfp207zinc finger protein 207106776297067784854Rat
1359125Omgoligodendrocyte-myelin glycoprotein106684565466848388Rat
1560058Phb-ps1prohibitin, pseudogene 1106892541668926320Rat
1359736Tmem98transmembrane protein 98106817338068184289Rat
1311901Rhbdl3rhomboid like 3106767699967731670Rat
1359436Pigsphosphatidylinositol glycan anchor biosynthesis, class S106559163865606175Rat
1359453Cct6bchaperonin containing TCP1 subunit 6B107006947970118194Rat
727916Rfflring finger and FYVE-like domain containing E3 ubiquitin protein ligase107015762170220618Rat
1587323LOC363652hypothetical LOC363652106725055767251189Rat
1565522Tmem132etransmembrane protein 132E106973553469794975Rat
1586597LOC686099similar to expressed in non-metastatic cells 1, protein (NM23A) (nucleoside diphosphate kinase)106749365267494211Rat
1561727Proca1protein interacting with cyclin A1106545445165469491Rat
1562573Zfp830zinc finger protein 830107011825070119714Rat
1561464Atad5ATPase family, AAA domain containing 5106742704267475825Rat
1566149Fam222bfamily with sequence similarity 222, member B106535124565416869Rat
1561602Nlknemo like kinase106584005265963932Rat
1565317RGD1565317similar to ubiquitin-like/S30 ribosomal fusion protein106650909266509537Rat
1593783LOC685475hypothetical protein LOC685475106614669366163653Rat
1588823LOC688465similar to RAN guanine nucleotide release factor106855654068557500Rat
1586495Ccl1C-C motif chemokine ligand 1106953497669537836Rat
1596488Rskrribosomal protein S6 kinase related106555278065557285Rat
1592624LOC685523similar to ribosomal protein L27a106655831866558813Rat
1593621Suz12SUZ12 polycomb repressive complex 2 subunit106732510167371588Rat
1593824Evi2aecotropic viral integration site 2A106687004866873948Rat
1598227LOC497963similar to Nitric oxide synthase, inducible (NOS type II) (Inducible NO synthase) (Inducible NOS) (iNOS)106628217166313373Rat
1596719Nufip2nuclear FMR1 interacting protein 2106516814565200210Rat
2321534LOC100360724bolA-like 1-like106508010365107471Rat
2320893LOC100361067proteasome subunit alpha type-3-like106583509265836317Rat
2323679LOC100359515rCG35337-like106478681164790215Rat
2323679LOC100359515rCG35337-like106476289464781478Rat
4888546Mir193amicroRNA 193a106706588567065996Rat
2325371Mir365bmicroRNA 365b106707979667079881Rat
2325379Mir193microRNA 193106706589667065981Rat
2325428Mir144microRNA 144106529136565291447Rat
2325479Mir632microRNA 632106776296567763042Rat
2325534Mir451amicroRNA 451a106529120465291275Rat
6490288LOC100911896uncharacterized LOC100911896106775309767754115Rat
6502209LOC100909659bolA-like protein 2-like106514362365149133Rat
6495961Evi2becotropic viral integration site 2B106685698066858598Rat
7522770LOC102551496uncharacterized LOC102551496106495051964951216Rat
7489011Mir6327microRNA 6327106897760168977733Rat
7510604LOC102547784uncharacterized LOC102547784106967443069683223Rat
7516121LOC102550051uncharacterized LOC102550051106711084667129708Rat
7519974LOC102551552uncharacterized LOC102551552106495084864953915Rat
7558326LOC102552843phosphoglycerate mutase 1-like106748239867484783Rat
7655370LOC102550234uncharacterized LOC102550234106697202966973369Rat
7655392LOC10255748460S ribosomal protein L12-like106739177967393887Rat
7577315LOC102552548kinase suppressor of Ras 1-like106632244666342519Rat
7644068LOC102549326putative 60S ribosomal protein L37a-like106555869965562667Rat
7592181LOC102550168uncharacterized LOC102550168106705805767058778Rat
7573752LOC102557169uncharacterized LOC102557169106499194164996292Rat
7563800LOC102552078uncharacterized LOC102552078106809124968099890Rat
7607868LOC102547954uncharacterized LOC102547954107013351070134603Rat
7708757LOC10254701760S ribosomal protein L27a-like106559523165596608Rat
7668412LOC102552371uncharacterized LOC102552371106665175966655307Rat
9128457LOC103693394GTPase Era, mitochondrial-like106528136865282931Rat
9105568LOC103693396uncharacterized LOC103693396106571265965720185Rat
9158006LOC103693398uncharacterized LOC103693398106662959966636640Rat
9158343LOC10369344160S ribosomal protein L27a pseudogene106521665765217096Rat
9084586C10H17orf102chromosome 10 open reading frame, human C17orf102106973511669737570Rat
9085314LOC103693400uncharacterized LOC103693400106723430467238513Rat
9312095LOC103693393basic salivary proline-rich protein 2-like106502856565044759Rat
9231942LOC103693399uncharacterized LOC103693399106692338066927135Rat
9278651LOC103693401uncharacterized LOC103693401106895348768957745Rat
9235506LOC103693397NADH dehydrogenase [ubiquinone] 1 beta subcomplex subunit 4 pseudogene106594036765946902Rat
9332269LOC103693402uncharacterized LOC103693402106906829969071180Rat
9359311LOC103693444glyceraldehyde-3-phosphate dehydrogenase-like106917698169185205Rat
9259038LOC10369344360S ribosomal protein L12-like106729961767300140Rat
9304230LOC103693395uncharacterized LOC103693395106555416565555793Rat
9455331LOC103693392uncharacterized LOC103693392106495739264976332Rat
9456662LOC103693403uncharacterized LOC103693403107012661070129053Rat
10411933LOC106736471antisense transcript of iNOS gene106476291164763482Rat
11443407LOC108352110uncharacterized LOC108352110106780955167811287Rat
11454687LOC108352210uncharacterized LOC108352210106865119068652332Rat
11467318LOC108352111uncharacterized LOC108352111106807650768089042Rat
11468471Trnat-cgu1transfer RNA threonine (anticodon CGU) 1106705888867058959Rat
11472642LOC108352113transcription factor BTF3 homolog 4 pseudogene107008499270086973Rat
11474710LOC108352223uncharacterized LOC108352223106572243165724569Rat
11435226LOC108352208uncharacterized LOC108352208106934715269362721Rat
11361296LOC108352209uncharacterized LOC108352209106855285168554998Rat
11437457LOC10835220760S ribosomal protein L35a pseudogene106858878268589148Rat
11405275LOC108352109pre-mRNA-splicing factor CWC22 homolog106755825367559048Rat
11390972LOC108352181nitric oxide synthase, inducible-like106478398864786814Rat
11402473LOC108352182predicted GPI-anchored protein 58106786155367862077Rat
11487211LOC108352224proline-rich receptor-like protein kinase PERK9106729664867298057Rat
11493017LOC108352112uncharacterized LOC108352112106946183869470696Rat

Markers in Region
The following Markers overlap with this region.    Full Report CSV TAB Printer Gviewer
RGD IDSymbolExpected SizeChrStartStopSpeciesMatch
10141D10Wox15257106559006565590318Ratregion
10142D10Arb9128106559012265590250Ratregion
10995D10Wox24138106618659766186734Ratregion
33846D10Mit2196106601552766015714Ratregion
34445D10Mgh6139106464817564648311Ratregion
34648D10Mgh14114106653972966539843Ratregion
37502D10Rat70127106912924869129386Ratregion
35228D10Rat29184106798803567988218Ratregion
36916D10Rat58170107020192370202084Ratregion
37084D10Rat28244106910614769106433Ratregion
37170D10Rat123202106882434968824552Ratregion
37676D10Rat68227106575026365750457Ratregion
35108D10Rat30158106517367865173843Ratregion
39954D10Rat195224106523428565234495Ratregion
38936D10Rat98235106934823369348459Ratregion
38986D10Rat69214106562022165620430Ratregion
41939D10Arb27125106830503768305173Ratregion
41468D10Rat155174106938559569385767Ratregion
42921D10Rat243222106455091264551135Ratregion
42922D10Rat240131106861789068618026Ratregion
42926D10Rat210160106923094369231114Ratregion
42926D10Rat210160106920480369204972Ratregion
44752D10Got80193106684222866842421Ratregion
44758D10Got84125106912871469128835Ratregion
44760D10Got87161107018246270182622Ratregion
625803D10Got82170106716052967160698Ratregion
66409D10Mco42330106618637866186714Ratregion
66491D10Mco61210106720961167209819Ratregion
66522D10Mco72250106681707966817314Ratregion
66552D10Mco1187106912360369123793Ratregion
66717D10Mco16186106651076666510959Ratregion
67320D10Arb17282106653970066539981Ratregion
1578847D10Chm131164106970680469706967Ratregion
1578872D10Chm127220106857404968574268Ratregion
1578899D10Chm228239106857792268578160Ratregion
1578900D10Chm166237106946518969465425Ratregion
1578904D10Chm133208107019375270193959Ratregion
1578907D10Chm129225106959657669596800Ratregion
1578915D10Chm124188106813519268135379Ratregion
1578918D10Chm167247106974204369742287Ratregion
1578931D10Chm171232107016696070167191Ratregion
1578948D10Chm132165107019762970197793Ratregion
1578987D10Chm229233106869792868698159Ratregion
1578992D10Chm170224107013713170137354Ratregion
1579009D10Chm125241106816398068164220Ratregion
1579015D10Chm128172106963889869639069Ratregion
1579024D10Chm168230106974950469749733Ratregion
1579039D10Chm169228106980879369809020Ratregion
1579051D10Chm130245106969978569700029Ratregion
1579090D10Chm226245106821007768210321Ratregion
1579129D10Chm126227106855746968557695Ratregion
1579182D10Chm186182107008923570089416Ratregion
1579191D10Chm227175106836226468362438Ratregion
1579193D10Chm165194106940684269407035Ratregion
1639492D10Got406213106749586767496079Ratregion
1642087D10Mco84165106991083269910996Ratregion
1642091D10Mco85345107001262870012972Ratregion
2308866D10Kini1178106942947069429647Ratregion
7205908UniSTS:4934301243106540359865404840Ratregion
5038694BE200478109106778253667782644Ratregion
5036143D11Bhm10689106678885066788938Ratregion
5036145D11Bhm13693106917346969173561Ratregion
5036147D11Bhm16374106629097666291049Ratregion
5036147D11Bhm16374106620148666201559Ratregion
5036151D11Bhm45103106486096564861067Ratregion
5036153D11Bhm6385106587404565874129Ratregion
5036163D11Seg19136106562449165624626Ratregion
5036165D11Seg28131106573252965732659Ratregion
5036167D11Seg36114106579370065793813Ratregion
7206580UniSTS:5471661396106541923665420631Ratregion
5039202RH127571183106561210465612286Ratregion
5036426Nf1141106691130566911445Ratregion
5036486Scya274106941258169412654Ratregion
5036899AU049558292106907070969071000Ratregion
5031338PMC145384P1658106941291269413569Ratregion
5034087RH141316204106738322267383425Ratregion
5028891RH142717281106685808266858362Ratregion
5029149RH143702273106778442467784696Ratregion
5034786AI011333137106572000965720145Ratregion
5034816AI013013115106541519065415304Ratregion
5035040UniSTS:259419436106978558869786023Ratregion
5035042D11Pas33242107006543870065679Ratregion
5035044D11Pas4281106961610169616181Ratregion
5032719RH135050216106577359065773805Ratregion
5027431AW491894130106687094966871078Ratregion
5025088BB241108138106562090965621046Ratregion
5033185RH137897163106574376265743924Ratregion
5028003M23501186106953503069535215Ratregion
5028011M84373189106631329066313478Ratregion
5028011M84373189106476309664763284Ratregion
5028143D11Mit68.1138106917398769174124Ratregion
5030771AW535144214106776229867762511Ratregion
5030979BE108709150106833807668338225Ratregion
5028527AU042359113106456532564565437Ratregion
5051507AI847581107106773143767731543Ratregion
5053937RH142937137106733356967333705Ratregion
5055243RH143689125106648202866482152Ratregion
5055281RH143711122106517070665170827Ratregion
5059418AW530666161106495092364951083Ratregion
5059418AW530666161106495064064951083Ratregion
5057938BF392929139106881209768812235Ratregion
5057994BF3864170106788071167880867Ratregion
505219122.MMHAP6FLH1.seq153106973636569736517Ratregion
5058068BF386532162106591638765916548Ratregion
5052689RH142209188106618605566186242Ratregion
5055579RH143882128106931421869314345Ratregion
5059886AI072008201106773134567731545Ratregion
5053239RH142534253106743211767432369Ratregion
5058478BE096286154106558830365588541Ratregion
5050230RH133936206106733101267331217Ratregion
5057566AI548110157106532941165329567Ratregion
5050538RH134114220106579003265790250Ratregion
5053575RH142728241106601966266019902Ratregion
5052683RH142205160106681730466817463Ratregion
5050658RH134183184106612034066120523Ratregion
5051773RH94650101106516737965167480Ratregion
5054735RH143395129106681159566811723Ratregion
5041704RH129010220107012055870120777Ratregion
5040914RH128556217106786708967867305Ratregion
5044522RH130652196106475987464760069Ratregion
5041418RH128845180106581113965811318Ratregion
5041692RH129003193106551758865517780Ratregion
5044642RH130721180106741925667419437Ratregion
5046588RH131840201106764027667640476Ratregion
5046204RH131618192106680371766803908Ratregion
5048872RH133154180106547050465470683Ratregion
5048888RH133164219106942461369424830Ratregion
5048986RH133220218106574033665740553Ratregion
5049226RH133358198107015769270157889Ratregion
5047886RH132585211106573951565739725Ratregion
5049136RH133306204106752828667528477Ratregion
5048326RH132839161106631344766313609Ratregion
5048326RH132839161106476296764763127Ratregion
5042244RH129323219106560591465606132Ratregion
5039866RH127952215107015781570158029Ratregion
5039480RH127729184106497933064979513Ratregion
5040298RH128203208106541879165418998Ratregion
5042592RH129528219106785727967857497Ratregion
5043042RH129795153106545200465452156Ratregion
5072526RH136900160106684107466841233Ratregion
5072618RH136954191106685708266857272Ratregion
5075252RH138487120106530955265309671Ratregion
5075460RH138606230106767909067679316Ratregion
5074150RH137850233106497517064975402Ratregion
5074328RH137953181106704793367048113Ratregion
5074340RH137960157106486315164863307Ratregion
5074412RH138002171106748153767481707Ratregion
5076960RH139478201106517010465170304Ratregion
5079370RH140957187106747625167476437Ratregion
5079556RH141066191106578236765782557Ratregion
5079616RH141104207107015591670156122Ratregion
5076538RH139234224106679854566798768Ratregion
5080246RH141469190106456279864562987Ratregion
5071084RH134877186107013353470133719Ratregion
5071072RH134870195106941355569413749Ratregion
5073796RH137643128107015882670158953Ratregion
5063392BE107606195106747003067470224Ratregion
5065024BE108934161106882153568821695Ratregion
5067104AU047962237106491424964914485Ratregion
5068224AU047274134106900025769000390Ratregion
5070041RH94434197106692850966928705Ratregion
5068942AU046828244107002571570025958Ratregion
5070271RH9457196106631320666313300Ratregion
5070271RH9457196106476327464763368Ratregion
5060056BI279325206106687034866870553Ratregion
5060390BI292081197106811790168118097Ratregion
5060828AI145271185106566496265665146Ratregion
5062792AW534454164106505566265055825Ratregion
5064138BI296210219106665183866652056Ratregion
5064406BI302108169106683552966835697Ratregion
5061848AW533877166106705812767058292Ratregion
5061964AW527866422106781096267811383Ratregion
5062122BE106231220106853149368531712Ratregion
5065468BE109015157107014582970145985Ratregion
5064120AA956238154106577088065771033Ratregion
5060824BE104553152106459020964590360Ratregion
5063032BF398270195106736915867369352Ratregion
5061374BI293876150106974547469745623Ratregion
5084162AA89381792106537878965378880Ratregion
5084196AI176383220106517443565174668Ratregion
5082257BE119054202106875551368755714Ratregion
5087538PMC30213P1660106786259767863256Ratregion
5082333BI27451095106810099068101084Ratregion
5087763D11Bhm14179106978610769786185Ratregion
5087773D11Seg31318106575678065757097Ratregion
5088092Scya11102106943840169438502Ratregion
5087918Foxn1168106563376965633936Ratregion
5089379AU049121289106836142468361708Ratregion
5089471AU049175280106627535766275637Ratregion
5089471AU049175280106615175466152034Ratregion
5090811AU049977264106567240365672666Ratregion
5083661BG381406211106547084465471054Ratregion
5084226AA848827181106682802966828209Ratregion
5087680Abr166106456516464565330Ratregion
5087759D11Bhm13762106925525169255312Ratregion
5087767D11Bhm84185106475519564755379Ratregion
5087775D11Seg37101106581344465813544Ratregion
5087777RH125886235107015779770158031Ratregion
5088511AU048613259106601542566015683Ratregion
5085072D11Pas27117106991653569916651Ratregion
5085074D11Pas39563106968058369681145Ratregion
5085076D11Pas45157106968931569689471Ratregion
5081060RH141942212107011937670119587Ratregion
5083007BF390612185106777318967773373Ratregion
5084782AI172099216106577581765776032Ratregion
5083397BF391060180106686878466868963Ratregion
5085754BM383586150106754007567540224Ratregion
5503160ZNF207-1144106777356267774280Ratregion
5503182ksks303396106547671265477107Ratregion
5503178ksks304342106547140865471749Ratregion
5504328D17S1484E0106554634065547009Ratregion
5504330D17S1500E189106777342567774188Ratregion
5504332D17S1516E168106777454867774715Ratregion
5504833ha22370106878082468781351Ratregion
5505184Lig30107014402670144890Ratregion
5505638UniSTS:4878580106540464365404840Ratregion
5505831Omg239106684606066846298Ratregion
5506483RH71331598107006960970070206Ratregion
5502084MARC_3929-3930:996679185:11066107015043670151501Ratregion
5500085UniSTS:236667204106737111967371322Ratregion
5502337RH124536258106481562364815880Ratregion
5500555RH135952200106736688167367525Ratregion
5500394GDB:4340120106510675265106879Ratregion
5500601RH136114199106578010065780298Ratregion
5501932MARC_17513-17514:1016473117:11431106777102167772451Ratregion
5502024MARC_24051-24052:1030022421:1105106547186365472589Ratregion
5506604CDK5R1_1797832106786241667863247Ratregion
5501806MARC_13669-13670:1002900020:10106482002864820701Ratregion
5502054MARC_26164-26165:1030455897:1760106635356966354328Ratregion
5502054MARC_26164-26165:1030455897:1760106632991566330674Ratregion
Position Markers

Flank 1: (D10Rat243)
Rat AssemblyChrPosition (strand)Source
Rnor_6.01064,550,912 - 64,551,135NCBI
Rnor_5.01063,463,237 - 63,463,460UniSTS
RGSC_v3.41067,774,947 - 67,775,171RGD
RGSC_v3.41067,774,948 - 67,775,171UniSTS
RGSC_v3.11067,788,570 - 67,788,794RGD
Celera1060,263,471 - 60,263,702UniSTS
Cytogenetic Map10q26UniSTS
SHRSP x BN Map1045.3799RGD
SHRSP x BN Map1045.3799UniSTS
Peak: (D10Rat123)
Rat AssemblyChrPosition (strand)Source
Rnor_6.01068,824,349 - 68,824,552NCBI
Rnor_5.01068,487,872 - 68,488,075UniSTS
RGSC_v3.41069,683,328 - 69,683,531UniSTS
RGSC_v3.41069,683,327 - 69,683,531RGD
RGSC_v3.11069,696,950 - 69,697,154RGD
Celera1065,400,614 - 65,400,817UniSTS
Cytogenetic Map10q26UniSTS
RH 2.0 Map10644.8RGD
FHH x ACI Map1054.7899RGD
Flank 2: (D10Rat58)
Rat AssemblyChrPosition (strand)Source
Rnor_6.01070,201,923 - 70,202,084NCBI
Rnor_5.01069,832,628 - 69,832,789UniSTS
Rnor_5.01070,966,621 - 70,966,782UniSTS
RGSC_v3.41071,067,299 - 71,067,824RGD
RGSC_v3.41071,067,496 - 71,067,657UniSTS
RGSC_v3.11071,080,922 - 71,081,447RGD
Celera1066,729,423 - 66,729,584UniSTS
RH 2.0 Map10693.7RGD
FHH x ACI Map1057.0099RGD


QTLs in Region (Rnor_6.0)
The following QTLs overlap with this region.    Full Report CSV TAB Printer Gviewer
CRRD IDSymbolNameLODP ValueTraitSub TraitChrStartStopSpecies
631554Bp133Blood pressure QTL 1330.005arterial blood pressure trait (VT:2000000)systolic blood pressure (CMO:0000004)1076442166221621Rat
8662860Vetf10Vascular elastic tissue fragility QTL 10artery integrity trait (VT:0010639)number of ruptures of the internal elastic lamina of the abdominal aorta and iliac arteries (CMO:0002562)10622909575983805Rat
61427Cia16Collagen induced arthritis QTL 163.2joint integrity trait (VT:0010548)joint inflammation composite score (CMO:0000919)10642907599492409Rat
2303118Mamtr7Mammary tumor resistance QTL 70.003mammary gland integrity trait (VT:0010552)mammary tumor growth rate (CMO:0000344)109841807108540162Rat
2301967Cm73Cardiac mass QTL 734.55heart left ventricle mass (VT:0007031)heart left ventricle weight to body weight ratio (CMO:0000530)101482789492423564Rat
631268Cia21Collagen induced arthritis QTL 213.1joint integrity trait (VT:0010548)joint inflammation composite score (CMO:0000919)1014827894107857673Rat
2316949Gluco60Glucose level QTL 603.7blood glucose amount (VT:0000188)blood glucose level (CMO:0000046)1014827894110992275Rat
1554317Bmd4Bone mineral density QTL 49.40.0001lumbar vertebra mineral mass (VT:0010511)volumetric bone mineral density (CMO:0001553)1020170031102897474Rat
70223Bp57Blood pressure QTL 575arterial blood pressure trait (VT:2000000)systolic blood pressure (CMO:0000004)102152390683549467Rat
70188BpQTLcluster1Blood pressure QTL cluster 14.864arterial blood pressure trait (VT:2000000)diastolic blood pressure (CMO:0000005)12152390690312401Rat
70188BpQTLcluster1Blood pressure QTL cluster 14.864arterial blood pressure trait (VT:2000000)systolic blood pressure (CMO:0000004)12152390690312401Rat
70188BpQTLcluster1Blood pressure QTL cluster 14.864arterial blood pressure trait (VT:2000000)mean arterial blood pressure (CMO:0000009)12152390690312401Rat
70188BpQTLcluster1Blood pressure QTL cluster 14.864arterial blood pressure trait (VT:2000000)pulse pressure (CMO:0000292)12152390690312401Rat
70198BpQTLcluster9Blood pressure QTL cluster 92.94arterial blood pressure trait (VT:2000000)mean arterial blood pressure (CMO:0000009)102152390690312401Rat
1581497Esta1Estrogen-induced thymic atrophy QTL 1thymus mass (VT:0004954)thymus wet weight (CMO:0000855)102170776664648311Rat
724556Pur2Proteinuria QTL 25.5urine protein amount (VT:0005160)urine protein level (CMO:0000591)102290149793886300Rat
1331762Rf40Renal function QTL 403.873kidney blood vessel physiology trait (VT:0100012)absolute change in renal vascular resistance (CMO:0001900)102386101566539843Rat
1331791Cm31Cardiac mass QTL 313.84606heart mass (VT:0007028)heart wet weight (CMO:0000069)1023861015112626471Rat
631267Cia20Collagen induced arthritis QTL 203.2joint integrity trait (VT:0010548)joint inflammation composite score (CMO:0000919)1024483076107857673Rat
61325Aia5Adjuvant induced arthritis QTL 50.01joint integrity trait (VT:0010548)joint inflammation composite score (CMO:0000919)1024483076107857673Rat
61354Pia10Pristane induced arthritis QTL 100.01joint integrity trait (VT:0010548)joint inflammation composite score (CMO:0000919)1024483076107857673Rat
70224Eae3Experimental allergic encephalomyelitis QTL 34.1nervous system integrity trait (VT:0010566)experimental autoimmune encephalomyelitis incidence/prevalence measurement (CMO:0001046)102723753064648311Rat
1298069Bp168Blood pressure QTL 1685.5blood pressure trait (VT:0000183)systolic blood pressure (CMO:0000004)1027237530101482600Rat
631542Bp82Blood pressure QTL 826.8arterial blood pressure trait (VT:2000000)systolic blood pressure (CMO:0000004)1027237530102427718Rat
2300171Bmd58Bone mineral density QTL 584.90.0001lumbar vertebra mineral mass (VT:0010511)volumetric bone mineral density (CMO:0001553)102878928073789280Rat
2292441Bp308Blood pressure QTL 308arterial blood pressure trait (VT:2000000)mean arterial blood pressure (CMO:0000009)103009990975099909Rat
10402859Bp381Blood pressure QTL 3810.002arterial blood pressure trait (VT:2000000)mean arterial blood pressure (CMO:0000009)103009990975099909Rat
724527Bp148Blood pressure QTL 1480.0001arterial blood pressure trait (VT:2000000)mean arterial blood pressure (CMO:0000009)103098380575983805Rat
1576311Pia26Pristane induced arthritis QTL 26joint integrity trait (VT:0010548)joint inflammation composite score (CMO:0000919)103191939778343192Rat
1578779Tcas10Tongue tumor susceptibility QTL 103.12tongue integrity trait (VT:0010553)number of squamous cell tumors of the tongue with diameter greater than 3 mm (CMO:0001950)103317903078179030Rat
631557Bp136Blood pressure QTL 1360.003arterial blood pressure trait (VT:2000000)systolic blood pressure (CMO:0000004)103334319278343192Rat
1576319Cia29Collagen induced arthritis QTL 29joint integrity trait (VT:0010548)joint inflammation composite score (CMO:0000919)103513942480139424Rat
6893342Cm78Cardiac mass QTL 780.10.88heart mass (VT:0007028)heart weight to body weight ratio (CMO:0000074)103618592982675365Rat
631552Vetf2Vascular elastic tissue fragility QTL 24.50.0002aorta elastic tissue integrity trait (VT:0010556)artery internal elastic lamina non-tumorous lesion count (CMO:0001913)103618592995845311Rat
1358897Stresp6Stress response QTL 64.170.022blood norepinephrine amount (VT:0005663)plasma norepinephrine level (CMO:0001010)103658437366539843Rat
61441Btemp1Thermal response to stress QTL 14body temperature trait (VT:0005535)core body temperature (CMO:0001036)103658456066015527Rat
2317042Aia20Adjuvant induced arthritis QTL 203.38joint integrity trait (VT:0010548)right rear ankle joint diameter (CMO:0002150)104051404485514044Rat
2317043Aia7Adjuvant induced arthritis QTL 73.82joint integrity trait (VT:0010548)left rear ankle joint diameter (CMO:0002149)104051404485514044Rat
1576308Schws1Schwannoma susceptibility QTL 10.0041nervous system integrity trait (VT:0010566)percentage of study population developing trigeminal nerve neurilemmomas during a period of time (CMO:0002017)1041260363106105607Rat
631269Cia22Collagen induced arthritis QTL 228.9joint integrity trait (VT:0010548)joint inflammation composite score (CMO:0000919)1041260363107857673Rat
631270Cia23Collagen induced arthritis QTL 233.9joint integrity trait (VT:0010548)joint inflammation composite score (CMO:0000919)1041260363107857673Rat
8552805Bw145Body weight QTL 1452.2body mass (VT:0001259)change in body weight to body weight ratio (CMO:0002216)104318865981042642Rat
1298078Stresp5Stress response QTL 52.990.00025blood corticosterone amount (VT:0005345)plasma corticosterone level (CMO:0001173)1043289657108540162Rat
61463Bp12Blood pressure QTL 126.30.0001arterial blood pressure trait (VT:2000000)systolic blood pressure (CMO:0000004)104370495588704955Rat
2300218Hpcl2Hepatic cholesterol level QTL 2liver cholesterol amount (VT:0010498)liver cholesterol level (CMO:0001597)104659302198939209Rat
9589030Epfw9Epididymal fat weight QTL 919.240.001epididymal fat pad mass (VT:0010421)epididymal fat pad weight to body weight ratio (CMO:0000658)104684834691848346Rat
7411614Foco18Food consumption QTL 180.001eating behavior trait (VT:0001431)feed conversion ratio (CMO:0001312)104684834691848346Rat
8694173Bw149Body weight QTL 1494.380.001body mass (VT:0001259)body weight gain (CMO:0000420)104684834691848346Rat
631547Bp87Blood pressure QTL 874.5arterial blood pressure trait (VT:2000000)systolic blood pressure (CMO:0000004)105063833795638337Rat
2293652Bmd22Bone mineral density QTL 224.90.0001femur mineral mass (VT:0010011)total volumetric bone mineral density (CMO:0001728)105128920384596393Rat
2293669Bmd33Bone mineral density QTL 334.50.0001femur strength trait (VT:0010010)femoral neck polar moment of inertia (CMO:0001670)105128920384596393Rat
2293679Bmd30Bone mineral density QTL 303.50.0001femur mineral mass (VT:0010011)total volumetric bone mineral density (CMO:0001728)105128920384596393Rat
2293705Bmd25Bone mineral density QTL 257.10.0001femur mineral mass (VT:0010011)cortical volumetric bone mineral density (CMO:0001730)105128920384596393Rat
7207811Bmd90Bone mineral density QTL 905.2femur size trait (VT:1000369)femoral neck cross-sectional area (CMO:0001697)105128920384596393Rat
1549846Scl47Serum cholesterol level QTL 473.6blood cholesterol amount (VT:0000180)serum total cholesterol level (CMO:0000363)105310471898104718Rat
61387Bp1Blood pressure QTL 15.1arterial blood pressure trait (VT:2000000)systolic blood pressure (CMO:0000004)1053621375112626471Rat
61387Bp1Blood pressure QTL 15.1arterial blood pressure trait (VT:2000000)diastolic blood pressure (CMO:0000005)1053621375112626471Rat
631530Tls3T-lymphoma susceptibility QTL 300.0001thymus integrity trait (VT:0010555)percentage of study population developing T-cell lymphomas during a period of time (CMO:0001911)105362581598939209Rat
631535Cm51Cardiac mass QTL 513heart mass (VT:0007028)calculated heart weight (CMO:0000073)105363748594807701Rat
1359017Hrtrt21Heart rate QTL 212.4heart pumping trait (VT:2000009)heart rate (CMO:0000002)1055224855100224855Rat
2306787Ean3Experimental allergic neuritis QTL 33.1nervous system integrity trait (VT:0010566)body weight loss (CMO:0001399)105567897669385767Rat
70171Cari1Carrageenan-induced inflammation QTL 14.90.0005hypodermis integrity trait (VT:0010550)inflammatory exudate volume (CMO:0001429)1055678976112626471Rat
70164Bw21Body weight QTL 214.360.00005body mass (VT:0001259)body weight (CMO:0000012)1055679084102427604Rat
1354608Cm33Cardiac mass QTL 332.8heart left ventricle mass (VT:0007031)heart left ventricle wet weight (CMO:0000071)1056698730101698730Rat
1549831Bss6Bone structure and strength QTL 64lumbar vertebra strength trait (VT:0010574)vertebra ultimate force (CMO:0001678)1060450007105450007Rat
2312662Slep8Serum leptin concentration QTL 80.05blood leptin amount (VT:0005667)serum leptin level (CMO:0000780)1060875260105875260Rat
2312668Scl65Serum cholesterol level QTL 650.001blood cholesterol amount (VT:0000180)serum total cholesterol level (CMO:0000363)1060875260105875260Rat
2312672Insul15Insulin level QTL 150.01blood insulin amount (VT:0001560)serum insulin level (CMO:0000358)1060875260105875260Rat
2293698Bss43Bone structure and strength QTL 435.330.0001lumbar vertebra size trait (VT:0010518)lumbar vertebra cross-sectional area (CMO:0001689)1062096293107096293Rat
1331839Eae18bExperimental allergic encephalomyelitis QTL 18b5.80.03nervous system integrity trait (VT:0010566)experimental autoimmune encephalomyelitis severity score (CMO:0001419)106455091270202084Rat
70363Bp71Blood pressure QTL 710.04arterial blood pressure trait (VT:2000000)mean arterial blood pressure (CMO:0000009)106464817584601269Rat
2306970Anxrr22Anxiety related response QTL 225.95fear/anxiety-related behavior trait (VT:1000241)number of periods of voluntary immobility (CMO:0001045)1064648175101691360Rat
1558643Cm44Cardiac mass QTL 444.80.0000368heart mass (VT:0007028)heart wet weight (CMO:0000069)1064648175102149713Rat
6893336Cm75Cardiac mass QTL 750.10.87heart mass (VT:0007028)heart weight to body weight ratio (CMO:0000074)1064648175102149713Rat
631526Bp76Blood pressure QTL 760.0001arterial blood pressure trait (VT:2000000)systolic blood pressure (CMO:0000004)106464831169123603Rat
61402Niddm3Non-insulin dependent diabetes mellitus QTL 34.58blood glucose amount (VT:0000188)blood glucose level (CMO:0000046)106464831185513822Rat
61449Ciaa2CIA Autoantibody QTL 27.1blood autoantibody amount (VT:0003725)calculated serum anti-type 2 collagen antibody titer (CMO:0001279)1065590122110590122Rat
2313103Bss80Bone structure and strength QTL 8020.0001tibia strength trait (VT:1000284)tibia midshaft endosteal cross-sectional area (CMO:0001716)1065992275110992275Rat
2313105Bss79Bone structure and strength QTL 791.80.0001tibia size trait (VT:0100001)tibia midshaft cross-sectional area (CMO:0001717)1065992275110992275Rat
7387312Bw125Body weight QTL 12530.0047retroperitoneal fat pad mass (VT:0010430)retroperitoneal fat pad weight (CMO:0000356)1067880046112626471Rat
1581559Eae18Experimental allergic encephalomyelitis QTL 180.00002nervous system integrity trait (VT:0010566)experimental autoimmune encephalomyelitis severity score (CMO:0001419)1067988218110992091Rat
2298481Eau9Experimental allergic uveoretinitis QTL 90.0169uvea integrity trait (VT:0010551)experimental autoimmune uveitis score (CMO:0001504)106830503785514044Rat
2301405Cm69Cardiac mass QTL 690.031heart mass (VT:0007028)heart wet weight to body weight ratio (CMO:0002408)106869792870167191Rat
11565453Kidm58Kidney mass QTL 580.002kidney mass (VT:0002707)both kidneys wet weight to body weight ratio (CMO:0000340)106869792870167191Rat
12903252Cm113Cardiac mass QTL 1130.047heart left ventricle mass (VT:0007031)heart left ventricle weight to body weight ratio (CMO:0000530)106869792870167191Rat
12903266Cm114Cardiac mass QTL 1140.02heart right ventricle mass (VT:0007033)heart right ventricle weight to body weight ratio (CMO:0000914)106869792870167191Rat
12903269Am15Aortic mass QTL 150.042aorta mass (VT:0002845)aorta weight to aorta length to body weight ratio (CMO:0002722)106869792870167191Rat
12880370Cm105Cardiac mass QTL 1050.008heart mass (VT:0007028)heart wet weight to body weight ratio (CMO:0002408)106869792870581793Rat
12880371Cm106Cardiac mass QTL 1060.007heart left ventricle mass (VT:0007031)heart left ventricle weight to body weight ratio (CMO:0000530)106869792870581793Rat
12880372Am12Aortic mass QTL 120.003aorta mass (VT:0002845)aorta weight to aorta length to body weight ratio (CMO:0002722)106869792870581793Rat
12880375Kidm66Kidney mass QTL 660.009kidney mass (VT:0002707)both kidneys wet weight to body weight ratio (CMO:0000340)106869792870581793Rat
1357344Bp249Blood pressure QTL 2490.0001arterial blood pressure trait (VT:2000000)systolic blood pressure (CMO:0000004)1069123603101482600Rat
631565Hcuc4Hepatic copper content QTL 44.15hepatic copper amount (VT:0003065)liver copper weight to liver dry weight ratio (CMO:0001512)106934845975983662Rat
8657410Bp374Blood pressure QTL 374heart left ventricle size trait (VT:0002753)heart left ventricular end-diastolic diameter (CMO:0000982)106938559570167191Rat
2317029Aia19Adjuvant induced arthritis QTL 192.98joint integrity trait (VT:0010548)left rear ankle joint diameter (CMO:0002149)1069385595112626471Rat
2317039Aia6Adjuvant induced arthritis QTL 64.31joint integrity trait (VT:0010548)right rear ankle joint diameter (CMO:0002150)1069385595112626471Rat
1579917Bp282Blood pressure QTL 2820.001arterial blood pressure trait (VT:2000000)mean arterial blood pressure (CMO:0000009)106980879370581793Rat
2289985Bp305Blood pressure QTL 305arterial blood pressure trait (VT:2000000)systolic blood pressure (CMO:0000004)106991083276109716Rat
2292440Bp312Blood pressure QTL 312arterial blood pressure trait (VT:2000000)mean arterial blood pressure (CMO:0000009)107016696070581793Rat
10450498Bp384Blood pressure QTL 3840.002arterial blood pressure trait (VT:2000000)mean arterial blood pressure (CMO:0000009)1070166960112626471Rat


Additional Information

Database Acc Id Source(s)
NCBI Gene Eae18b


Nomenclature History
Date Current Symbol Current Name Previous Symbol Previous Name Description Reference Status
2006-04-14 Eae18b  Experimental allergic encephalomyelitis QTL 18b  Eae20  Experimental allergic encephalomyelitis QTL 20  Symbol and Name updated 1299863 APPROVED

RGD Curation Notes
Note Type Note Reference
qtl_cross_type Intercross  
qtl_disease syntenic region on human chromosome 17q11 displays linkage to multiple sclerosis 1302437