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The Rat Genome Database curation tool suite: a set of optimized software tools enabling efficient acquisition, organization, and presentation of biological data.

Authors: Laulederkind, SJ  Shimoyama, M  Hayman, GT  Lowry, TF  Nigam, R  Petri, V  Smith, JR  Wang, SJ  De Pons, J  Kowalski, G  Liu, W  Rood, W  Munzenmaier, DH  Dwinell, MR  Twigger, SN  Jacob, HJ  Jacob, Howard J 
Citation: Laulederkind SJ, etal., Database (Oxford). 2011 Feb 14;2011:bar002. Print 2011.
Pubmed: (View Article at PubMed) PMID:21321022
DOI: Full-text: DOI:10.1093/database/bar002

The Rat Genome Database (RGD) is the premier repository of rat genomic and genetic data and currently houses over 40 000 rat gene records as well as human and mouse orthologs, 1771 rat and 1911 human quantitative trait loci (QTLs) and 2209 rat strains. Biological information curated for these data objects includes disease associations, phenotypes, pathways, molecular functions, biological processes and cellular components. A suite of tools has been developed to aid curators in acquiring and validating data objects, assigning nomenclature, attaching biological information to objects and making connections among data types. The software used to assign nomenclature, to create and edit objects and to make annotations to the data objects has been specifically designed to make the curation process as fast and efficient as possible. The user interfaces have been adapted to the work routines of the curators, creating a suite of tools that is intuitive and powerful. Database URL: http://rgd.mcw.edu.

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Additional Information

 
CRRD Object Information
CRRD ID: 4892268
Created: 2011-02-16
Species: All species
Last Modified: 2011-02-16
Status: ACTIVE



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RGD is funded by grant HL64541 from the National Heart, Lung, and Blood Institute on behalf of the NIH.