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Variant : CV513797 (GRCh37/hg19 10q11.21-26.3(chr10:42347406-135534747)x1) Homo sapiens

Symbol: CV513797
Name: GRCh37/hg19 10q11.21-26.3(chr10:42347406-135534747)x1
Condition: PARP Inhibitor response [RCV000626438]
Clinical Significance: drug response
Last Evaluated: 11/27/2017
Review Status: no assertion criteria provided
Related Genes: A1CF   ABCC2   ABLIM1   ABRAXAS2   ACADSB   ACSL5   ACSM6   ACTA2   ACTR1A   ADAM12   ADAM8   ADAMTS14   ADD3   ADGRA1   ADIRF   ADIRF-AS1   ADK   ADO   ADRA2A   ADRB1   AFAP1L2   AGAP11   AGAP4   AGAP5   AGAP6   AGAP9   AIFM2   ALDH18A1   ALOX5   ANAPC16   ANK3   ANKRD1   ANKRD2   ANKRD22   ANXA11   ANXA7   ANXA8   ANXA8L1   AP3M1   ARHGAP19   ARHGAP22   ARID5B   ARL3   ARMH3   ARMS2   AS3MT   ASAH2   ASAH2B   ASCC1   ATAD1   ATE1   ATOH7   ATP5MD   ATRNL1   AVPI1   BAG3   BBIP1   BCCIP   BICC1   BLNK   BLOC1S2   BMPR1A   BMS1   BNIP3   BORCS7   BTAF1   BTBD16   BTRC   BUB3   C10orf105   C10orf120   C10orf53   C10orf55   C10orf62   C10orf71   C10orf82   C10orf88   C10orf90   C10orf95   C10orf99   CABCOCO1   CACUL1   CALHM1   CALHM2   CALHM3   CALY   CAMK2G   CASC2   CASP7   CC2D2B   CCAR1   CCDC172   CCDC186   CCDC6   CCNJ   CCSER2   CDH23   CDHR1   CDK1   CEP55   CFAP43   CFAP46   CFAP58   CFAP70   CH25H   CHAT   CHCHD1   CHST15   CHST3   CHUK   CISD1   CLRN3   CNNM1   CNNM2   COL13A1   COL17A1   COMTD1   COX15   CPEB3   CPN1   CPXM2   CRTAC1   CSGALNACT2   CSTF2T   CTBP2   CTNNA3   CUEDC2   CUTC   CUZD1   CWF19L1   CXCL12   CYP17A1   CYP26A1   CYP26C1   CYP2C18   CYP2C19   CYP2C8   CYP2C9   CYP2E1   DCLRE1A   DDIT4   DDX21   DDX50   DENND10   DEPP1   DHX32   DKK1   DLG5   DMBT1   DNA2   DNAJB12   DNAJC12   DNAJC9   DNMBP   DNTT   DOCK1   DPCD   DPYSL4   DRGX   DUPD1   DUSP13   DUSP5   DYDC1   DYDC2   EBF3   ECD   ECHS1   EDRF1   EEF1AKMT2   EGR2   EIF3A   EIF4EBP2   EIF5AL1   ELOVL3   EMX2   EMX2OS   ENO4   ENTPD1   ENTPD7   ERCC6   ERLIN1   EXOC6   EXOSC1   FAM13C   FAM149B1   FAM160B1   FAM170B   FAM204A   FAM241B   FAM24A   FAM24B   FAM25A   FAM25C   FAM25E   FAM25G   FAM53B   FANK1   FAS   FAS-AS1   FBXL15   FBXW4   FFAR4   FGF8   FGFBP3   FGFR2   FOXI2   FRA10AC1   FRAT1   FRAT2   FRG2B   FRMPD2   FUOM   FUT11   FXYD4   GBF1   GDF10   GDF2   GFRA1   GHITM   GLRX3   GLUD1   GOLGA7B   GOT1   GPAM   GPR26   GPRIN2   GRID1   GRK5   GSTO1   GSTO2   HABP2   HECTD2   HELLS   HERC4   HHEX   HIF1AN   HK1   HKDC1   HMX2   HMX3   HNRNPF   HNRNPH3   HOGA1   HPS1   HPS6   HPSE2   HSPA12A   HTR7   HTRA1   IDE   IFIT1   IFIT1B   IFIT2   IFIT3   IFIT5   IKZF5   INA   INPP5A   INPP5F   INSYN2A   IPMK   ITPRIP   JAKMIP3   JMJD1C   KAT6B   KAZALD1   KCNIP2   KCNK18   KCNMA1   KIF11   KIF20B   KIFBP   KLLN   KNDC1   LBX1   LCOR   LDB1   LDB3   LGI1   LHPP   LINC01166   LINC01520   LINC02870   LIPA   LIPF   LIPJ   LIPK   LIPM   LIPN   LOXL4   LRIT1   LRIT2   LRMDA   LRRC18   LRRC20   LRRC27   LRRTM3   LZTS2   MACROH2A2   MAPK8   MARCHF5   MARCHF8   MARVELD1   MAT1A   MBL2   MCMBP   MCU   MFSD13A   MGMT   MICU1   MINPP1   MIR107   MIR146B   MIR346   MKI67   MMP21   MMRN2   MMS19   MORN4   MRPL43   MRPS16   MSMB   MSS51   MTG1   MTRNR2L5   MXI1   MYOF   MYOZ1   MYPN   NANOS1   NCOA4   NDST2   NDUFB8   NEURL1   NEUROG3   NFKB2   NHLRC2   NKX1-2   NKX2-3   NKX6-2   NOC3L   NODAL   NOLC1   NPFFR1   NPM3   NPS   NPY4R   NRAP   NRBF2   NRG3   NSMCE4A   NT5C2   NUDT13   NUTM2A   NUTM2B   OAT   OGA   OGDHL   OIT3   OPALIN   OPN4   OR13A1   P4HA1   PALD1   PANK1   PAOX   PAPSS2   PARG   PAX2   PBLD   PCBD1   PCDH15   PCGF5   PCGF6   PDCD11   PDCD4   PDE6C   PDLIM1   PDZD7   PDZD8   PGAM1   PGBD3   PHYHIPL   PI4K2A   PIK3AP1   PITX3   PKD2L1   PLA2G12B   PLAC9   PLAU   PLCE1   PLEKHA1   PLEKHS1   PLPP4   PNLIP   PNLIPRP1   PNLIPRP2   PNLIPRP3   POLL   POLR3A   PPA1   PPIF   PPP1R3C   PPP2R2D   PPP3CB   PPRC1   PRAP1   PRDX3   PRF1   PRKG1   PRLHR   PRXL2A   PSAP   PSD   PSTK   PTEN   PTPN20   PTPRE   PWWP2B   PYROXD2   R3HCC1L   RAB11FIP2   RASGEF1A   RASSF4   RBM20   RBP3   RBP4   REEP3   RET   RGR   RGS10   RHOBTB1   RNLS   RPP30   RPS24   RRP12   RTKN2   RUFY2   SAMD8   SAR1A   SCD   SEC23IP   SEC24C   SEC31B   SEMA4G   SFR1   SFRP5   SFTPA1   SFTPA2   SFTPD   SFXN2   SFXN3   SFXN4   SGMS1   SGPL1   SH2D4B   SH3PXD2A   SHLD2   SHOC2   SHTN1   SIRT1   SLC16A12   SLC16A9   SLC18A2   SLC18A3   SLC25A16   SLC25A28   SLC29A3   SLC35G1   SLF2   SLIT1   SLK   SMC3   SMNDC1   SNCG   SNORA12   SORBS1   SORCS1   SORCS3   SPOCK2   SPRN   SRGN   STAMBPL1   STK32C   STN1   STOX1   SUFU   SUPV3L1   SYCE1   SYNPO2L   SYT15   TACC2   TACR2   TAF5   TBATA   TBC1D12   TCERG1L   TCERG1L-AS1   TCF7L2   TCTN3   TDRD1   TECTB   TET1   TEX36   TFAM   TIAL1   TIMM23   TLL2   TLX1   TLX1NB   TM9SF3   TMEM254   TMEM26   TMEM273   TMEM72   TNKS2   TRIM8   TRUB1   TSPAN14   TSPAN15   TUBGCP2   TWNK   TYSND1   UBE2D1   UBTD1   UNC5B   UROS   USP54   UTF1   VAX1   VCL   VDAC2   VENTX   VPS26A   VSIR   VSTM4   VTI1A   VWA2   WAPL   WASHC2A   WASHC2C   WBP1L   WDFY4   WDR11   WNT8B   XPNPEP1   ZCCHC24   ZDHHC16   ZDHHC6   ZFAND4   ZFYVE27   ZMIZ1   ZNF22   ZNF22-AS1   ZNF239   ZNF32   ZNF33B   ZNF365   ZNF485   ZNF488   ZNF503   ZNF511   ZNF518A   ZRANB1   ZSWIM8   ZWINT  
Variant Type: copy number loss (SO:0001743)
Source: CLINVAR
Evidence: clinical testing
Position
Human AssemblyChrPosition (strand)Source
GRCh371042,347,406 - 135,534,747CLINVAR
Cytogenetic Map1010q11.21-26.3CLINVAR




Additional Information

External Database Links
 
CRRD Object Information
CRRD ID: 13613382
Created: 2018-06-12
Species: Homo sapiens
Last Modified: 2020-01-14
Status: ACTIVE



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RGD is funded by grant HL64541 from the National Heart, Lung, and Blood Institute on behalf of the NIH.