| 1000 | 2313399 | Anxrr28 | Anxiety related response QTL 28 | | | aggression-related behavior trait (VT:0015014) | tameness/aggressiveness composite score (CMO:0002136) | 6 | 104381930 | 138066274 | Rat | n/a | region | qtl |
| 1000 | 738034 | Anxrr5 | Anxiety related response QTL 5 | 5.9 | | exploratory behavior trait (VT:0010471) | percentage of entries into a discrete space in an experimental apparatus (CMO:0000961) | 6 | 88507712 | 133507712 | Rat | n/a | region | qtl |
| 1000 | 1331799 | Bp211 | Blood pressure QTL 211 | 3.66407 | | arterial blood pressure trait (VT:2000000) | mean arterial blood pressure (CMO:0000009) | 6 | 75623277 | 136426962 | Rat | n/a | region | qtl |
| 1000 | 1331725 | Bp212 | Blood pressure QTL 212 | 3.52475 | | arterial blood pressure trait (VT:2000000) | mean arterial blood pressure (CMO:0000009) | 6 | 97949772 | 133849286 | Rat | n/a | region | qtl |
| 1000 | 1331797 | Bp213 | Blood pressure QTL 213 | 3.291 | | arterial blood pressure trait (VT:2000000) | mean arterial blood pressure (CMO:0000009) | 6 | 108154445 | 133849286 | Rat | n/a | region | qtl |
| 1000 | 1641917 | Colcr5 | Colorectal carcinoma resistance QTL 5 | 3.18 | 0.0009 | intestine integrity trait (VT:0010554) | benign colorectal tumor number (CMO:0001795) | 6 | 127286494 | 144745573 | Rat | n/a | region | qtl |
| 1000 | 61329 | Eae9 | Experimental allergic encephalomyelitis QTL 9 | 3.7 | | body mass (VT:0001259) | change in body weight (CMO:0002045) | 6 | 127286494 | 147991367 | Rat | n/a | region | qtl |
| 1000 | 1300076 | Glom8 | Glomerulus QTL 8 | 7 | 0.000000009 | kidney glomerulus morphology trait (VT:0005325) | count of superficial glomeruli directly contacting the kidney surface (CMO:0001001) | 6 | 91703409 | 136703409 | Rat | n/a | region | qtl |
| 1000 | 10054138 | Gmadr3 | Adrenal mass QTL 3 | 3.68 | 0.00045 | adrenal gland mass (VT:0010420) | both adrenal glands wet weight (CMO:0000164) | 6 | 89631358 | 134631358 | Rat | n/a | region | qtl |
| 1000 | 1298087 | Iddm18 | Insulin dependent diabetes mellitus QTL 18 | | 0.0001 | urine glucose amount (VT:0001758) | percentage of study population developing diabetes mellitus during a period of time (CMO:0001114) | 6 | 121224054 | 135658578 | Rat | n/a | region | qtl |
| 1000 | 2293085 | Iddm29 | Insulin dependent diabetes mellitus QTL 29 | 7.66 | | blood glucose amount (VT:0000188) | blood glucose level (CMO:0000046) | 6 | 127286494 | 147249902 | Rat | n/a | region | qtl |
| 1000 | 71111 | Iddm8 | Insulin dependent diabetes mellitus QTL 8 | 1.9 | 0.002 | blood glucose amount (VT:0000188) | plasma glucose level (CMO:0000042) | 6 | 132652096 | 138068606 | Rat | n/a | region | qtl |
| 1000 | 4145118 | Mcs26 | Mammary carcinoma susceptibility QTL 26 | | 0.0001 | mammary gland integrity trait (VT:0010552) | post-insult time to mammary tumor formation (CMO:0000345) | 6 | 111134524 | 138065254 | Rat | n/a | region | qtl |
| 1000 | 737976 | Pia24 | Pristane induced arthritis QTL 24 | | | joint integrity trait (VT:0010548) | joint inflammation composite score (CMO:0000919) | 6 | 117355600 | 147991367 | Rat | n/a | region | qtl |
| 1000 | 61414 | Pia3 | Pristane induced arthritis QTL 3 | 4.5 | | joint integrity trait (VT:0010548) | post-insult time to onset of experimental arthritis (CMO:0001450) | 6 | 99273921 | 144792678 | Rat | n/a | region | qtl |
| 1000 | 2312560 | Pur20 | Proteinuria QTL 20 | 2.1 | 0.005 | total urine protein amount (VT:0000032) | urine total protein excretion rate (CMO:0000756) | 6 | 130561943 | 144745573 | Rat | n/a | region | qtl |
| 1000 | 1581550 | Pur8 | Proteinuria QTL 8 | | | total urine protein amount (VT:0000032) | urine total protein excretion rate (CMO:0000756) | 6 | 75623393 | 136142742 | Rat | n/a | region | qtl |
| 1000 | 12801411 | Schws8 | Schwannoma susceptibility QTL 8 | | | nervous system integrity trait (VT:0010566) | percentage of study population developing trigeminal nerve neurilemmomas during a period of time (CMO:0002017) | 6 | 99273921 | 144273921 | Rat | n/a | region | qtl |
| 1000 | 1358355 | Srcrt4 | Stress Responsive Cort QTL 4 | 6.39 | | blood corticosterone amount (VT:0005345) | plasma corticosterone level (CMO:0001173) | 6 | 104363890 | 147991367 | Rat | n/a | region | qtl |
| 1000 | 10054123 | Srcrt6 | Stress Responsive Cort QTL 6 | 2.5 | 0.0043 | blood corticosterone amount (VT:0005345) | plasma corticosterone level (CMO:0001173) | 6 | 89631358 | 134631358 | Rat | n/a | region | qtl |
| 1000 | 724513 | Uae14 | Urinary albumin excretion QTL 14 | 6.5 | | urine albumin amount (VT:0002871) | urine albumin excretion rate (CMO:0000757) | 6 | 88996335 | 139410483 | Rat | n/a | region | qtl |
| 1000 | 731173 | Uae22 | Urinary albumin excretion QTL 22 | 10.1 | | urine albumin amount (VT:0002871) | urine albumin excretion rate (CMO:0000757) | 6 | 68781170 | 147991367 | Rat | n/a | region | qtl |
| 1000 | 1581563 | Uae33 | Urinary albumin excretion QTL 33 | | | urine albumin amount (VT:0002871) | urine albumin excretion rate (CMO:0000757) | 6 | 75623393 | 136142742 | Rat | n/a | region | qtl |
| 1000 | 2290393 | Uae37 | Urinary albumin excretion QTL 37 | | 0.0001 | urine albumin amount (VT:0002871) | urine albumin excretion rate (CMO:0000757) | 6 | 68781170 | 147991367 | Rat | n/a | region | qtl |
| 1000 | 724536 | Uae7 | Urinary albumin excretion QTL 7 | 3.5 | | urine albumin amount (VT:0002871) | urine albumin level (CMO:0000130) | 6 | 75623277 | 136143011 | Rat | n/a | region | qtl |
| 1000 | 2303624 | Vencon5 | Ventilatory control QTL 5 | 4.45 | | respiration trait (VT:0001943) | minute ventilation (VE) (CMO:0000132) | 6 | 92879510 | 137879510 | Rat | n/a | region | qtl |
| 1000 | 8552796 | Vie3 | Viral induced encephalitis QTL 3 | 2.6 | | brain integrity trait (VT:0010579) | encephalitis incidence/prevalence measurement (CMO:0002361) | 6 | 101207574 | 147991367 | Rat | n/a | region | qtl |