| 1000 | 1558825 | Aabpr_m | aberrant activation of B cell proliferation (mouse) | | | Not determined | | 2 | 116202748 | 122377053 | Mouse | n/a | region | qtl |
| 1000 | 1300798 | Actre3_m | activity response to ethanol 3 (mouse) | | | Not determined | | 2 | 112194642 | 128331901 | Mouse | n/a | region | qtl |
| 1000 | 1301415 | Actre4_m | activity response to ethanol 4 (mouse) | | | Not determined | | 2 | 112194642 | 128331901 | Mouse | n/a | region | qtl |
| 1000 | 1301087 | Bbaa15_m | B.burgdorferi-associated arthritis 15 (mouse) | | | Not determined | | 2 | 110647738 | 144647887 | Mouse | n/a | region | qtl |
| 1000 | 1301618 | Bglu1_m | blood glucose level 1 (mouse) | | | Not determined | | 2 | 118112449 | 174483070 | Mouse | n/a | region | qtl |
| 1000 | 1301834 | Bits1_m | bitterness sensitivity 1 (mouse) | | | Not determined | | 2 | 87610298 | 121610433 | Mouse | n/a | region | qtl |
| 1000 | 10043875 | Bw25_m | body weight QTL 25 (mouse) | | | Not determined | | 2 | 107413756 | 141413756 | Mouse | n/a | region | qtl |
| 1000 | 1301098 | Cd8mts3_m | CD8 memory T cell subset 3 (mouse) | | | Not determined | | 2 | 91259629 | 125259759 | Mouse | n/a | region | qtl |
| 1000 | 12904007 | Cfq7_m | conditioned fear QTL 7 (mouse) | | | | | 2 | 118526291 | 125206952 | Mouse | n/a | region | qtl |
| 1000 | 1301201 | Chab1_m | cholesterol absorption 1 (mouse) | | | Not determined | | 2 | 111709108 | 145709243 | Mouse | n/a | region | qtl |
| 1000 | 10045885 | Cplaq15_m | circadian period of locomotor activity 15 (mouse) | | | Not determined | | 2 | 111085773 | 154512747 | Mouse | n/a | region | qtl |
| 1000 | 1302174 | Dssc2_m | dextran sodium sulfate induced colitis QTL2 (mouse) | | | Not determined | | 2 | 24334620 | 148858457 | Mouse | n/a | region | qtl |
| 1000 | 12904935 | Edlmmq2_m | extensor digitorum longus muscle mass QTL 2 (mouse) | | | | | 2 | 97379883 | 131379883 | Mouse | n/a | region | qtl |
| 1000 | 1302071 | Fembrs1_m | femur breaking strength 1 (mouse) | | | Not determined | | 2 | 101112449 | 135112609 | Mouse | n/a | region | qtl |
| 1000 | 4142223 | Femwf4_m | femur work to failure 4 (mouse) | | | Not determined | | | 88313078 | 122313225 | Mouse | n/a | region | qtl |
| 1000 | 12904954 | Gmmq2_m | gastrocnemius muscle mass QTL 2 (mouse) | | | | | 2 | 97379883 | 131379883 | Mouse | n/a | region | qtl |
| 1000 | 1302203 | Gvhd3_m | graft-versus host disease 3 (mouse) | | | Not determined | | 2 | 101112449 | 135112609 | Mouse | n/a | region | qtl |
| 1000 | 1301755 | Hrq1_m | heart rate quantitative locus 1 (mouse) | | | Not determined | | 2 | 111331784 | 145331901 | Mouse | n/a | region | qtl |
| 1000 | 10412082 | Hylaq1_m | Hyperlocomotor activity related QTL 1 (mouse) | | | Not determined | | 2 | 84182854 | 148825550 | Mouse | n/a | region | qtl |
| 1000 | 4141802 | Ignpq1_m | IgA nephropathy QTL 1 (mouse) | | | Not determined | | 2 | 100993579 | 134993788 | Mouse | n/a | region | qtl |
| 1000 | 1301905 | Lgth2_m | body length 2 (mouse) | | | Not determined | | 2 | 111331784 | 145331901 | Mouse | n/a | region | qtl |
| 1000 | 1301344 | Lith1_m | lithogenic gene 1 (mouse) | | | Not determined | | 2 | 45457623 | 145470727 | Mouse | n/a | region | qtl |
| 1000 | 1300852 | Lmr14_m | leishmaniasis resistance 14 (mouse) | | | Not determined | | 2 | 86265371 | 120265478 | Mouse | n/a | region | qtl |
| 1000 | 11041906 | Lmr28a_m | leishmaniasis resistance 28a (mouse) | | | | | 2 | 103265371 | 129371085 | Mouse | n/a | region | qtl |
| 1000 | 11049568 | Lmr28c_m | leishmaniasis resistance 28c (mouse) | | | | | 2 | 97292889 | 131293051 | Mouse | n/a | region | qtl |
| 1000 | 11049569 | Lmr28d_m | leishmaniasis resistance 28d (mouse) | | | | | 2 | 97292889 | 131293051 | Mouse | n/a | region | qtl |
| 1000 | 11049565 | Lmr28g_m | leishmaniasis resistance 28g (mouse) | | | | | 2 | 86265371 | 120265478 | Mouse | n/a | region | qtl |
| 1000 | 11038702 | Ltpr2_m | Leishmania tropica response 2 (mouse) | | | | | 2 | 103265371 | 167370436 | Mouse | n/a | region | qtl |
| 1000 | 11038700 | Ltpr2a_m | Leishmania tropica response 2a (mouse) | | | | | 2 | 112370826 | 146371085 | Mouse | n/a | region | qtl |
| 1000 | 11038699 | Ltpr2b_m | Leishmania tropica response 2b (mouse) | | | | | 2 | 112370826 | 146371085 | Mouse | n/a | region | qtl |
| 1000 | 11038698 | Ltpr2c_m | Leishmania tropica response 2c (mouse) | | | | | 2 | 86265371 | 120265478 | Mouse | n/a | region | qtl |
| 1000 | 11038697 | Ltpr2d_m | Leishmania tropica response 2d (mouse) | | | | | 2 | 86265371 | 120265478 | Mouse | n/a | region | qtl |
| 1000 | 11038696 | Ltpr2f_m | Leishmania tropica response 2f (mouse) | | | | | 2 | 115370937 | 149371074 | Mouse | n/a | region | qtl |
| 1000 | 11039521 | Ltpr2g_m | Leishmania tropica response 2g (mouse) | | | | | 2 | 115370937 | 149371074 | Mouse | n/a | region | qtl |
| 1000 | 11039520 | Ltpr2h_m | Leishmania tropica response 2h (mouse) | | | | | 2 | 112370826 | 146371085 | Mouse | n/a | region | qtl |
| 1000 | 5491197 | Mobq5_m | multigenic obesity QTL 5 (mouse) | | | Not determined | | 2 | 65439402 | 162677006 | Mouse | n/a | region | qtl |
| 1000 | 5491196 | Mobq6_m | multigenic obesity QTL 6 (mouse) | | | Not determined | | 2 | 85893925 | 181254801 | Mouse | n/a | region | qtl |
| 1000 | 1302033 | Nsv1_m | Neuroadapted Sindbis viral RNA level 1 (mouse) | | | Not determined | | 2 | 111781466 | 145781606 | Mouse | n/a | region | qtl |
| 1000 | 1301825 | Pbrgcsf1_m | peripheral blood stem cell response to granulocyte colony stimulating factor 1 (mouse) | | | Not determined | | 2 | 106391660 | 140391809 | Mouse | n/a | region | qtl |
| 1000 | 1300793 | Pcfm2_m | periosteal circumference and femur length 2 (mouse) | | | Not determined | | 2 | 111331784 | 145331901 | Mouse | n/a | region | qtl |
| 1000 | 4141155 | Plast2b_m | plasma plant sterol 2b (mouse) | | | Not determined | | 2 | 84182854 | 148680255 | Mouse | n/a | region | qtl |
| 1000 | 1301295 | Prdt1_m | prion disease incubation time 1 (mouse) | | | Not determined | | 2 | 116235703 | 150235821 | Mouse | n/a | region | qtl |
| 1000 | 12910814 | Pwbwq1_m | pre-weaning body weight QTL 1 (mouse) | | | | | 2 | 118758772 | 160769245 | Mouse | n/a | region | qtl |
| 1000 | 12910795 | Pwbwq5_m | post-weaning body weight QTL 5 (mouse) | | | | | 2 | 118758772 | 160769245 | Mouse | n/a | region | qtl |
| 1000 | 12910812 | Pwgrq1_m | pre-weaning growth rate QTL 1 (mouse) | | | | | 2 | 118758772 | 160769245 | Mouse | n/a | region | qtl |
| 1000 | 12910799 | Pwgrq2_m | pre-weaning growth rate QTL 2 (mouse) | | | | | 2 | 118758772 | 160769245 | Mouse | n/a | region | qtl |
| 1000 | 1558881 | Ses7_m | salmonella enteritidis susceptibility 7 (mouse) | | | Not determined | | 2 | 116464410 | 150464554 | Mouse | n/a | region | qtl |
| 1000 | 1558990 | Skmw9_m | skeletal muscle weight 9 (mouse) | | | Not determined | | 2 | 111331784 | 145331901 | Mouse | n/a | region | qtl |
| 1000 | 11528549 | Sluc31_m | susceptibility to lung cancer 31 (mouse) | | | | | 2 | 74693773 | 129371085 | Mouse | n/a | region | qtl |
| 1000 | 11532731 | Sluc31a_m | susceptibility to lung cancer 31a (mouse) | | | | | 2 | 88184658 | 122184825 | Mouse | n/a | region | qtl |
| 1000 | 1301909 | Smdq2_m | segregation of mitochondrial DNA QTL 2 (mouse) | | | Not determined | | 2 | 92948120 | 126948262 | Mouse | n/a | region | qtl |
| 1000 | 4141854 | T2dm2sa_m | type 2 diabetes mellitus 2 in SMXA RI mice (mouse) | | | Not determined | | 2 | 29417935 | 148533014 | Mouse | n/a | region | qtl |
| 1000 | 1301029 | T2dm3_m | type 2 diabetes mellitus 3 (mouse) | | | Not determined | | 2 | 114457594 | 132872237 | Mouse | n/a | region | qtl |
| 1000 | 1301330 | Tbbmd2_m | total body bone mineral density 2 (mouse) | | | Not determined | | 2 | 101112449 | 135112609 | Mouse | n/a | region | qtl |
| 1000 | 13506762 | Tbvq2_m | trabecular bone volume QTL 2 (mouse) | | | | | 2 | 115600000 | 124900000 | Mouse | n/a | region | qtl |
| 1000 | 13824983 | Vclq1_m | curvilinear velocity QTL 1 (mouse) | | | | | 2 | 62000000 | 137000000 | Mouse | n/a | region | qtl |